CD1C3_CAVPO
ID CD1C3_CAVPO Reviewed; 332 AA.
AC Q9QZY6;
DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=T-cell surface glycoprotein CD1c3;
DE AltName: CD_antigen=CD1c-3;
DE Flags: Precursor;
GN Name=CD1C3;
OS Cavia porcellus (Guinea pig).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae;
OC Cavia.
OX NCBI_TaxID=10141;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=Hartley, and NIH 2; TISSUE=Thymus;
RX PubMed=10553074;
RA Dascher C.C., Hiromatsu K., Naylor J.W., Brauer P.P., Brown K.A.,
RA Storey J.R., Behar S.M., Kawasaki E.S., Porcelli S.A., Brenner M.B.,
RA LeClair K.P.;
RT "Conservation of a CD1 multigene family in the guinea pig.";
RL J. Immunol. 163:5478-5488(1999).
CC -!- FUNCTION: Antigen-presenting protein that binds self and non-self lipid
CC and glycolipid antigens and presents them to T-cell receptors on
CC natural killer T-cells. {ECO:0000250}.
CC -!- SUBUNIT: Heterodimer with B2M (beta-2-microglobulin). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Single-pass type I
CC membrane protein {ECO:0000250}. Endosome membrane {ECO:0000250}.
CC Note=Subject to intracellular trafficking between the cell membrane and
CC endosomes. {ECO:0000250}.
CC -!- MISCELLANEOUS: During protein synthesis and maturation, CD1 family
CC members bind endogenous lipids that are replaced by lipid or glycolipid
CC antigens when the proteins are internalized and pass through endosomes
CC or lysosomes, before trafficking back to the cell surface.
CC {ECO:0000250}.
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DR EMBL; AF145489; AAF12744.1; -; mRNA.
DR RefSeq; NP_001166326.1; NM_001172855.1.
DR AlphaFoldDB; Q9QZY6; -.
DR SMR; Q9QZY6; -.
DR STRING; 10141.ENSCPOP00000020952; -.
DR Ensembl; ENSCPOT00000046800; ENSCPOP00000026320; ENSCPOG00000032010.
DR GeneID; 100379555; -.
DR KEGG; cpoc:100379555; -.
DR CTD; 100379555; -.
DR eggNOG; ENOG502SJH6; Eukaryota.
DR GeneTree; ENSGT01040000240396; -.
DR HOGENOM; CLU_047501_9_2_1; -.
DR InParanoid; Q9QZY6; -.
DR OMA; FVNQSWA; -.
DR OrthoDB; 827472at2759; -.
DR Proteomes; UP000005447; Unassembled WGS sequence.
DR Bgee; ENSCPOG00000032010; Expressed in zone of skin.
DR GO; GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0002250; P:adaptive immune response; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 3.30.500.10; -; 1.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR003597; Ig_C1-set.
DR InterPro; IPR011161; MHC_I-like_Ag-recog.
DR InterPro; IPR037055; MHC_I-like_Ag-recog_sf.
DR InterPro; IPR011162; MHC_I/II-like_Ag-recog.
DR Pfam; PF07654; C1-set; 1.
DR Pfam; PF16497; MHC_I_3; 1.
DR SMART; SM00407; IGc1; 1.
DR SUPFAM; SSF48726; SSF48726; 1.
DR SUPFAM; SSF54452; SSF54452; 1.
DR PROSITE; PS50835; IG_LIKE; 1.
PE 2: Evidence at transcript level;
KW Adaptive immunity; Cell membrane; Disulfide bond; Endosome; Glycoprotein;
KW Immunity; Immunoglobulin domain; Membrane; Reference proteome; Signal;
KW Transmembrane; Transmembrane helix.
FT SIGNAL 1..17
FT /evidence="ECO:0000255"
FT CHAIN 18..332
FT /note="T-cell surface glycoprotein CD1c3"
FT /id="PRO_0000014589"
FT TOPO_DOM 18..300
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 301..321
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 322..332
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT DOMAIN 205..292
FT /note="Ig-like"
FT CARBOHYD 25
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 38
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 75
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 146
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 120..184
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
FT DISULFID 224..279
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
SQ SEQUENCE 332 AA; 37437 MW; 19DA52E30CC05DFC CRC64;
MLFLQFLFLD VVLGGSITKN VVQENISFYL MQISSYANQS WVQNCGSGWL GELQTHGWDS
ESGTIIFLHT WSRGNFSNEE LEDIPLLFHV YFSGLSLEVQ DRVSQLQIKY PFDIQARAGC
ELHSGEPPKG FLYGALNGLN FLSYQNKSWV PSPEGGNRAQ KVCDLLNTYE GIKETAYHLI
RDTCPRFLLG LLDAGKMDLQ RQVRPEVWLS SSPNLKPGRL LLACHVSGFY PKPIWVMWMR
GAQEQLETKQ GDILPHADGT WYLRVTLDVA AKEAAGLSCR VRHSSLRDQD IILYWGHGLS
VILITFAVIV PLVLLIILVL LCKKCCTYQG IP