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CD44_MESAU
ID   CD44_MESAU              Reviewed;         431 AA.
AC   Q60522; Q60523;
DT   01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1997, sequence version 1.
DT   03-AUG-2022, entry version 107.
DE   RecName: Full=CD44 antigen;
DE   AltName: Full=Extracellular matrix receptor III;
DE            Short=ECMR-III;
DE   AltName: Full=GP90 lymphocyte homing/adhesion receptor;
DE   AltName: Full=HAM1 antigen;
DE   AltName: Full=HUTCH-I;
DE   AltName: Full=Heparan sulfate proteoglycan;
DE   AltName: Full=Hermes antigen;
DE   AltName: Full=Hyaluronate receptor;
DE   AltName: Full=Phagocytic glycoprotein 1;
DE            Short=PGP-1;
DE   AltName: Full=Phagocytic glycoprotein I;
DE            Short=PGP-I;
DE   AltName: CD_antigen=CD44;
DE   Flags: Precursor;
GN   Name=CD44;
OS   Mesocricetus auratus (Golden hamster).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea;
OC   Cricetidae; Cricetinae; Mesocricetus.
OX   NCBI_TaxID=10036;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2).
RC   STRAIN=LVG; TISSUE=Alveolar macrophage;
RA   Paulauskis J.D., Kobzik L., Gerard C., Katler M., Godleski J.J.;
RL   Submitted (JUN-1995) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Cell-surface receptor that plays a role in cell-cell
CC       interactions, cell adhesion and migration, helping them to sense and
CC       respond to changes in the tissue microenvironment. Participates thereby
CC       in a wide variety of cellular functions including the activation,
CC       recirculation and homing of T-lymphocytes, hematopoiesis, inflammation
CC       and response to bacterial infection. Engages, through its ectodomain,
CC       extracellular matrix components such as hyaluronan/HA, collagen, growth
CC       factors, cytokines or proteases and serves as a platform for signal
CC       transduction by assembling, via its cytoplasmic domain, protein
CC       complexes containing receptor kinases and membrane proteases. Such
CC       effectors include PKN2, the RhoGTPases RAC1 and RHOA, Rho-kinases and
CC       phospholipase C that coordinate signaling pathways promoting calcium
CC       mobilization and actin-mediated cytoskeleton reorganization essential
CC       for cell migration and adhesion. {ECO:0000250|UniProtKB:P15379,
CC       ECO:0000250|UniProtKB:P16070}.
CC   -!- SUBUNIT: Interacts with PKN2 (By similarity). Interacts with TIAM1 and
CC       TIAM2 (By similarity). Interacts with HA, as well as other
CC       glycosaminoglycans, collagen, laminin, and fibronectin via its N-
CC       terminal segment. Interacts with UNC119. Interacts with PDPN (via
CC       extracellular domain); this interaction is required for PDPN-mediated
CC       directional migration and regulation of lamellipodia
CC       extension/stabilization during cell spreading and migration (By
CC       similarity). Interacts with RDX, EZR and MSN (By similarity). Interacts
CC       with EGFR (By similarity). Interacts with CD74; this complex is
CC       essential for the MIF-induced signaling cascade that results in B cell
CC       survival (By similarity). {ECO:0000250|UniProtKB:P15379,
CC       ECO:0000250|UniProtKB:P16070}.
CC   -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250|UniProtKB:P15379};
CC       Single-pass type I membrane protein {ECO:0000250|UniProtKB:P15379}.
CC       Cell projection, microvillus {ECO:0000250|UniProtKB:P15379}.
CC       Note=Colocalizes with actin in membrane protrusions at wounding edges.
CC       Co-localizes with RDX, EZR and MSN in microvilli.
CC       {ECO:0000250|UniProtKB:P15379}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC         Comment=Additional isoforms seem to exist.;
CC       Name=1;
CC         IsoId=Q60522-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q60522-2; Sequence=VSP_005322;
CC   -!- DOMAIN: The lectin-like LINK domain is responsible for hyaluronan
CC       binding. {ECO:0000250}.
CC   -!- PTM: N-glycosylated. {ECO:0000250|UniProtKB:P16070}.
CC   -!- PTM: O-glycosylated; contains chondroitin sulfate glycans which can be
CC       more or less sulfated. {ECO:0000250|UniProtKB:P16070}.
CC   -!- PTM: Phosphorylated; activation of PKC results in the dephosphorylation
CC       of Ser-395 (constitutive phosphorylation site), and the phosphorylation
CC       of Ser-361. {ECO:0000250}.
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DR   EMBL; U10880; AAC13767.1; -; mRNA.
DR   EMBL; U10881; AAA19316.1; -; mRNA.
DR   RefSeq; NP_001268802.1; NM_001281873.1.
DR   RefSeq; NP_001268803.1; NM_001281874.1.
DR   AlphaFoldDB; Q60522; -.
DR   SMR; Q60522; -.
DR   GeneID; 101826056; -.
DR   CTD; 960; -.
DR   eggNOG; ENOG502RX7Q; Eukaryota.
DR   Proteomes; UP000189706; Unplaced.
DR   GO; GO:0016324; C:apical plasma membrane; ISS:UniProtKB.
DR   GO; GO:0042995; C:cell projection; ISS:UniProtKB.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0031258; C:lamellipodium membrane; ISS:UniProtKB.
DR   GO; GO:0005902; C:microvillus; ISS:UniProtKB.
DR   GO; GO:0005886; C:plasma membrane; ISS:UniProtKB.
DR   GO; GO:0005540; F:hyaluronic acid binding; IEA:InterPro.
DR   GO; GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
DR   GO; GO:2000392; P:regulation of lamellipodium morphogenesis; ISS:UniProtKB.
DR   GO; GO:0044319; P:wound healing, spreading of cells; ISS:UniProtKB.
DR   Gene3D; 3.10.100.10; -; 1.
DR   InterPro; IPR016186; C-type_lectin-like/link_sf.
DR   InterPro; IPR001231; CD44_antigen.
DR   InterPro; IPR043210; CD44_antigen-like.
DR   InterPro; IPR016187; CTDL_fold.
DR   InterPro; IPR000538; Link_dom.
DR   PANTHER; PTHR10225; PTHR10225; 1.
DR   PANTHER; PTHR10225:SF6; PTHR10225:SF6; 1.
DR   Pfam; PF00193; Xlink; 1.
DR   PRINTS; PR00658; CD44.
DR   PRINTS; PR01265; LINKMODULE.
DR   SMART; SM00445; LINK; 1.
DR   SUPFAM; SSF56436; SSF56436; 1.
DR   PROSITE; PS01241; LINK_1; 1.
DR   PROSITE; PS50963; LINK_2; 1.
PE   2: Evidence at transcript level;
KW   Alternative splicing; Cell adhesion; Cell membrane; Cell projection;
KW   Disulfide bond; Glycoprotein; Membrane; Phosphoprotein; Proteoglycan;
KW   Receptor; Reference proteome; Signal; Transmembrane; Transmembrane helix.
FT   SIGNAL          1..22
FT                   /evidence="ECO:0000250"
FT   CHAIN           23..431
FT                   /note="CD44 antigen"
FT                   /id="PRO_0000026688"
FT   TOPO_DOM        23..338
FT                   /note="Extracellular"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        339..359
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        360..431
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   DOMAIN          34..122
FT                   /note="Link"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00323"
FT   REGION          158..191
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          219..243
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          226..338
FT                   /note="Stem"
FT   REGION          279..333
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          362..380
FT                   /note="Required for interaction with EZR, MSN and RDX and
FT                   for co-localization to microvilli"
FT                   /evidence="ECO:0000250|UniProtKB:P15379"
FT   REGION          376..396
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        158..173
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        176..191
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        279..332
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        376..390
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         43
FT                   /ligand="hyaluronan"
FT                   /ligand_id="ChEBI:CHEBI:132153"
FT                   /evidence="ECO:0000250"
FT   BINDING         80
FT                   /ligand="hyaluronan"
FT                   /ligand_id="ChEBI:CHEBI:132153"
FT                   /evidence="ECO:0000250"
FT   BINDING         81
FT                   /ligand="hyaluronan"
FT                   /ligand_id="ChEBI:CHEBI:132153"
FT                   /evidence="ECO:0000250"
FT   BINDING         107
FT                   /ligand="hyaluronan"
FT                   /ligand_id="ChEBI:CHEBI:132153"
FT                   /evidence="ECO:0000250"
FT   MOD_RES         361
FT                   /note="Phosphoserine; by PKC"
FT                   /evidence="ECO:0000250|UniProtKB:P16070"
FT   MOD_RES         375
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P16070"
FT   MOD_RES         386
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P15379"
FT   MOD_RES         395
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P16070"
FT   CARBOHYD        27
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        59
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        102
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        112
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        122
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        174
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        256
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        325
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   DISULFID        30..131
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00323"
FT   DISULFID        55..120
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00323"
FT   DISULFID        79..99
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00323"
FT   VAR_SEQ         222..291
FT                   /note="TRSGGKDGRRGGGLPKDATTSLEGYTTHYPETMENGTLTPVTPAKTGVFGET
FT                   EVTVAEDSNFNVDGSLPG -> R (in isoform 2)"
FT                   /evidence="ECO:0000303|Ref.1"
FT                   /id="VSP_005322"
SQ   SEQUENCE   431 AA;  46807 MW;  4300262E0C6BEA6A CRC64;
     MDKFWWHAAW GLCLLPLSLA QQQIDLNITC RYAGVFHVEK NGRYSISRTE AADLCQAFNS
     TLPTMDQMVM ALSKGFETCR YGFIEGHVVI PRIQPNAICA ANHTGVYILT SNTSHYDTYC
     FNASAPLEED CTSVTDLPNS FEGPVTITIV NRDGTRYSKK GEYRTHQEDI DASNTTDDDV
     SSGSSSEKST SGGYVFHTYL PTIHSTADQD DPYFIGSTMA TTRSGGKDGR RGGGLPKDAT
     TSLEGYTTHY PETMENGTLT PVTPAKTGVF GETEVTVAED SNFNVDGSLP GDQDSSMDPR
     GNSLTVTDGS KLTGHSSGNQ DSGANTTSRP GRKPQIPEWL IVLASLLALA LILAVCIAVN
     SRRRCGQKKK LVINSGNGKV EDRKPSELNG EASKSQEMVH LVNKEPSETP DQFMTADETR
     NLQNVDMKIG V
 
 
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