CDHR1_CHICK
ID CDHR1_CHICK Reviewed; 865 AA.
AC Q8UVJ7;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2002, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Cadherin-related family member 1;
DE AltName: Full=Photoreceptor cadherin;
DE Short=prCAD;
DE AltName: Full=Protocadherin-21;
DE Flags: Precursor;
GN Name=CDHR1; Synonyms=PCDH21, PRCAD;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=11738025; DOI=10.1016/s0896-6273(01)00531-1;
RA Rattner A., Smallwood P.M., Williams J., Cooke C., Savchenko A.,
RA Lyubarsky A., Pugh E.N., Nathans J.;
RT "A photoreceptor-specific cadherin is essential for the structural
RT integrity of the outer segment and for photoreceptor survival.";
RL Neuron 32:775-786(2001).
CC -!- FUNCTION: Potential calcium-dependent cell-adhesion protein.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
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DR EMBL; AF426394; AAL65141.1; -; mRNA.
DR RefSeq; NP_001001759.1; NM_001001759.1.
DR AlphaFoldDB; Q8UVJ7; -.
DR SMR; Q8UVJ7; -.
DR STRING; 9031.ENSGALP00000040376; -.
DR PaxDb; Q8UVJ7; -.
DR GeneID; 414847; -.
DR KEGG; gga:414847; -.
DR CTD; 92211; -.
DR VEuPathDB; HostDB:geneid_414847; -.
DR eggNOG; KOG3594; Eukaryota.
DR InParanoid; Q8UVJ7; -.
DR OrthoDB; 237790at2759; -.
DR PhylomeDB; Q8UVJ7; -.
DR PRO; PR:Q8UVJ7; -.
DR Proteomes; UP000000539; Unplaced.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:InterPro.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR GO; GO:0007156; P:homophilic cell adhesion via plasma membrane adhesion molecules; IEA:InterPro.
DR InterPro; IPR002126; Cadherin-like_dom.
DR InterPro; IPR015919; Cadherin-like_sf.
DR InterPro; IPR020894; Cadherin_CS.
DR Pfam; PF00028; Cadherin; 5.
DR PRINTS; PR00205; CADHERIN.
DR SMART; SM00112; CA; 6.
DR SUPFAM; SSF49313; SSF49313; 6.
DR PROSITE; PS00232; CADHERIN_1; 2.
DR PROSITE; PS50268; CADHERIN_2; 6.
PE 2: Evidence at transcript level;
KW Calcium; Cell adhesion; Membrane; Receptor; Reference proteome; Repeat;
KW Signal; Transmembrane; Transmembrane helix.
FT SIGNAL 1..23
FT /evidence="ECO:0000255"
FT CHAIN 24..865
FT /note="Cadherin-related family member 1"
FT /id="PRO_0000318501"
FT TOPO_DOM 24..705
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 706..726
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 727..865
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT DOMAIN 38..137
FT /note="Cadherin 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043"
FT DOMAIN 138..249
FT /note="Cadherin 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043"
FT DOMAIN 250..356
FT /note="Cadherin 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043"
FT DOMAIN 362..475
FT /note="Cadherin 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043"
FT DOMAIN 476..579
FT /note="Cadherin 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043"
FT DOMAIN 571..690
FT /note="Cadherin 6"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043"
FT REGION 782..810
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 793..807
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 865 AA; 95256 MW; B540C82B6D7F6384 CRC64;
MKHVRHFIPS LFLSLVHVCL VQANYAPYFF DNGARSTNGN MALLSLSEDT PVGSHVYTLN
GTDPEGDPVT YGLTYEAGSR RYFSVDGNLG NVTLIEELDR EKEDEIEVIV SISDGLSTVS
EKVRILVMDA NDESPEFINT PYIVQVPENS PSGSSIFKIE AVDRDTGSGG SITYFLQNIH
ANKFTIDRHS GVLRIKSGVT LDYEKSRTHF VVVVAKDGGG KLRGDNKVFS ATTTVTVNVE
DVQDTPPMFI GTPYYGYVYE DTLPGSEVLT VVALDGDRGK PNNIHYCIVN GSEGSFEISN
TTGAISVIKS PNQLKKEVYE LRVQASEVSP EGDVSAYAFA TVTIRVVDLN NHPPTFYGES
GPQNRFELTM YEHPPEGEIL RGLKITVNDS DQGANAKFNL RLVGPGGIFR VVPLTVLNEA
QVTIIVENSA AIDYEKFKVL TFKLLAIEVN TPEKFSSTAD IAIRLLDTND NVPKFSSDYY
IARIPENSPG GSNVVAVTAT DPDSGLWGEV KYSIYGTGAD LFLIHPSTGI IYTQPWAVLD
AEVNSKYNFY VKAEDTDGKY SLAEVFITVL DVNDHSPEFN ENIQEKTMII GSPVKIEAID
QDAEEPNNIV DYSIMQADPA NVFDIDQSTG EIKLKSYIRS LDIIHNITKN KDCIWSLVVQ
AKDRGSPSFS TTAVLKIDIT EETLHKGPMA AFLMQTKDNP MKALGVLAGV MGIMVLITIM
ISTAMFWRNK RSNKIMPVRR IIKKRQTQQS RTVRMEWLKF KRPSNAAEKF VVEDDAKSLQ
NENSNNNVQA APVPPAAPLP PPPPALAASG NTTAWRVPTV SGSLTPKFIN KQLKKRGHSS
THNALVSELK MKFEKRNASM GEPHI