CDII_YERPY
ID CDII_YERPY Reviewed; 177 AA.
AC A0A0R4I987; A0A0H3B164;
DT 08-MAY-2019, integrated into UniProtKB/Swiss-Prot.
DT 08-MAY-2019, sequence version 2.
DT 25-MAY-2022, entry version 20.
DE RecName: Full=Immunity protein CdiI-YPIII {ECO:0000303|PubMed:26449640};
DE Short=CdiI-YPIII;
GN Name=cdiI {ECO:0000303|PubMed:26449640}; OrderedLocusNames=YPK_0576;
OS Yersinia pseudotuberculosis serotype O:3 (strain YPIII).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Yersinia.
OX NCBI_TaxID=502800;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=YPIII;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C.,
RA Han C., Tapia R., Schmutz J., Larimer F., Land M., Hauser L.,
RA Challacombe J.F., Green L., Lindler L.E., Nikolich M.P., Richardson P.;
RT "Complete sequence of Yersinia pseudotuberculosis YPIII.";
RL Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0007744|PDB:4ZQU}
RP X-RAY CRYSTALLOGRAPHY (2.09 ANGSTROMS) IN COMPLEX WITH CDIA, FUNCTION, AND
RP SUBUNIT.
RC STRAIN=YPIII;
RX PubMed=26449640; DOI=10.1016/j.jmb.2015.09.020;
RA Morse R.P., Willett J.L., Johnson P.M., Zheng J., Credali A., Iniguez A.,
RA Nowick J.S., Hayes C.S., Goulding C.W.;
RT "Diversification of beta-augmentation interactions between CDI
RT toxin/immunity proteins.";
RL J. Mol. Biol. 427:3766-3784(2015).
CC -!- FUNCTION: Immunity protein component of a toxin-immunity protein
CC module, which functions as a cellular contact-dependent growth
CC inhibition (CDI) system. CDI modules allow bacteria to communicate with
CC and inhibit the growth of closely related neighboring bacteria in a
CC contact-dependent fashion. Neutralizes the toxic activity of cognate
CC toxin CdiA-YPIII (residues 954-1077). Does not inhibit toxic activity
CC of CdiA from other toxin-immunity modules.
CC {ECO:0000269|PubMed:26449640}.
CC -!- SUBUNIT: Interacts with the C-terminal DNase fragment (residues 954-
CC 1077) of cognate toxin CdiA-YPIII. {ECO:0000269|PubMed:26449640}.
CC -!- MISCELLANEOUS: Encoded in a defective cdi locus that has been
CC inactivated by gene rearragements and deletions.
CC {ECO:0000305|PubMed:26449640}.
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DR EMBL; CP000950; ACA66879.1; -; Genomic_DNA.
DR RefSeq; WP_012303509.1; NZ_CP009792.1.
DR PDB; 4ZQU; X-ray; 2.09 A; B=1-177.
DR PDBsum; 4ZQU; -.
DR AlphaFoldDB; A0A0R4I987; -.
DR SMR; A0A0R4I987; -.
DR EnsemblBacteria; ACA66879; ACA66879; YPK_0576.
DR KEGG; ypy:YPK_0576; -.
DR PATRIC; fig|502800.11.peg.1189; -.
DR OMA; MACCWIT; -.
DR CDD; cd13445; CDI_inhibitor_EC869_like; 1.
DR Gene3D; 3.40.1590.10; -; 1.
DR InterPro; IPR009888; CdiI_Proteobact.
DR InterPro; IPR037891; Cdil-like_sf.
DR Pfam; PF07262; CdiI; 1.
DR SUPFAM; SSF160207; SSF160207; 1.
PE 1: Evidence at protein level;
KW 3D-structure.
FT CHAIN 1..177
FT /note="Immunity protein CdiI-YPIII"
FT /id="PRO_0000446874"
FT STRAND 8..14
FT /evidence="ECO:0007829|PDB:4ZQU"
FT STRAND 19..32
FT /evidence="ECO:0007829|PDB:4ZQU"
FT STRAND 38..41
FT /evidence="ECO:0007829|PDB:4ZQU"
FT HELIX 47..59
FT /evidence="ECO:0007829|PDB:4ZQU"
FT STRAND 63..67
FT /evidence="ECO:0007829|PDB:4ZQU"
FT STRAND 70..72
FT /evidence="ECO:0007829|PDB:4ZQU"
FT HELIX 82..85
FT /evidence="ECO:0007829|PDB:4ZQU"
FT HELIX 87..105
FT /evidence="ECO:0007829|PDB:4ZQU"
FT HELIX 110..115
FT /evidence="ECO:0007829|PDB:4ZQU"
FT STRAND 118..124
FT /evidence="ECO:0007829|PDB:4ZQU"
FT STRAND 129..133
FT /evidence="ECO:0007829|PDB:4ZQU"
FT STRAND 135..138
FT /evidence="ECO:0007829|PDB:4ZQU"
FT STRAND 141..143
FT /evidence="ECO:0007829|PDB:4ZQU"
FT STRAND 146..149
FT /evidence="ECO:0007829|PDB:4ZQU"
FT STRAND 153..155
FT /evidence="ECO:0007829|PDB:4ZQU"
FT HELIX 161..172
FT /evidence="ECO:0007829|PDB:4ZQU"
SQ SEQUENCE 177 AA; 19925 MW; 5FA5F4BD40CE1311 CRC64;
MNDIVKSAWA SVKMNTDFIC VDTYSGYRSN QLDPLGVQHL SSPDVSDLDL GEMVKDALSH
SRFVLPAPRT DIWIHPEVTF DLDLYDSRRT VERYDEWVKK LMVHYGYKTK RALFKDMKSC
DICCNHDAIT ISPTRHEKLE VWGGTGLKGS DNVILSVDSS PTEIGAGLRL ALSRCKG