CDIP1_RAT
ID CDIP1_RAT Reviewed; 208 AA.
AC Q5U2U6;
DT 20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT 07-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=Cell death-inducing p53-target protein 1;
DE AltName: Full=LITAF-like protein;
GN Name=Cdip1;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Heart;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: Acts as an important p53/TP53-apoptotic effector. Regulates
CC TNF-alpha-mediated apoptosis in a p53/TP53-dependent manner.
CC {ECO:0000250|UniProtKB:Q9H305}.
CC -!- SUBCELLULAR LOCATION: Late endosome membrane
CC {ECO:0000250|UniProtKB:Q9H305}; Peripheral membrane protein
CC {ECO:0000250|UniProtKB:Q9H305}; Cytoplasmic side
CC {ECO:0000250|UniProtKB:Q9H305}. Lysosome membrane
CC {ECO:0000250|UniProtKB:Q9H305}; Peripheral membrane protein
CC {ECO:0000250|UniProtKB:Q9H305}; Cytoplasmic side
CC {ECO:0000250|UniProtKB:Q9H305}.
CC -!- DOMAIN: The LITAF domain is stabilized by a bound zinc ion. The LITAF
CC domain contains an amphipathic helix that mediates interaction with
CC lipid membranes. {ECO:0000250|UniProtKB:Q99732}.
CC -!- SIMILARITY: Belongs to the CDIP1/LITAF family. {ECO:0000305}.
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DR EMBL; BC085860; AAH85860.1; -; mRNA.
DR RefSeq; NP_001008361.1; NM_001008360.1.
DR RefSeq; XP_006245873.1; XM_006245811.3.
DR RefSeq; XP_006245874.1; XM_006245812.3.
DR RefSeq; XP_006245875.1; XM_006245813.3.
DR RefSeq; XP_006245876.1; XM_006245814.3.
DR RefSeq; XP_006245877.1; XM_006245815.3.
DR RefSeq; XP_006245878.1; XM_006245816.2.
DR AlphaFoldDB; Q5U2U6; -.
DR BioGRID; 261967; 1.
DR STRING; 10116.ENSRNOP00000004999; -.
DR PhosphoSitePlus; Q5U2U6; -.
DR PaxDb; Q5U2U6; -.
DR PRIDE; Q5U2U6; -.
DR Ensembl; ENSRNOT00000004999; ENSRNOP00000004999; ENSRNOG00000003328.
DR GeneID; 360480; -.
DR KEGG; rno:360480; -.
DR UCSC; RGD:1310686; rat.
DR CTD; 29965; -.
DR RGD; 1310686; Cdip1.
DR eggNOG; ENOG502S2GM; Eukaryota.
DR GeneTree; ENSGT00940000157696; -.
DR HOGENOM; CLU_095549_0_0_1; -.
DR InParanoid; Q5U2U6; -.
DR OMA; THEIGLM; -.
DR OrthoDB; 1564782at2759; -.
DR PhylomeDB; Q5U2U6; -.
DR TreeFam; TF313294; -.
DR PRO; PR:Q5U2U6; -.
DR Proteomes; UP000002494; Chromosome 10.
DR Bgee; ENSRNOG00000003328; Expressed in Ammon's horn and 19 other tissues.
DR Genevisible; Q5U2U6; RN.
DR GO; GO:0098560; C:cytoplasmic side of late endosome membrane; ISS:UniProtKB.
DR GO; GO:0098574; C:cytoplasmic side of lysosomal membrane; ISS:UniProtKB.
DR GO; GO:0005634; C:nucleus; ISO:RGD.
DR GO; GO:0008270; F:zinc ion binding; IBA:GO_Central.
DR GO; GO:0006915; P:apoptotic process; ISO:RGD.
DR GO; GO:0042771; P:intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator; ISO:RGD.
DR GO; GO:0033209; P:tumor necrosis factor-mediated signaling pathway; ISO:RGD.
DR InterPro; IPR006629; LITAF.
DR InterPro; IPR037519; LITAF_fam.
DR PANTHER; PTHR23292; PTHR23292; 1.
DR Pfam; PF10601; zf-LITAF-like; 1.
DR SMART; SM00714; LITAF; 1.
DR PROSITE; PS51837; LITAF; 1.
PE 2: Evidence at transcript level;
KW Apoptosis; Endosome; Lysosome; Membrane; Metal-binding; Reference proteome;
KW Zinc.
FT CHAIN 1..208
FT /note="Cell death-inducing p53-target protein 1"
FT /id="PRO_0000280338"
FT DOMAIN 122..206
FT /note="LITAF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01181"
FT REGION 1..70
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 164..184
FT /note="Membrane-binding amphipathic helix"
FT /evidence="ECO:0000305"
FT COMPBIAS 32..67
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 142
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:Q99732"
FT BINDING 145
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:Q99732"
FT BINDING 194
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:Q99732"
FT BINDING 197
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:Q99732"
SQ SEQUENCE 208 AA; 21858 MW; 7CA564534957DEDF CRC64;
MSNEPPPPYP GGPTAPLLEE KSGAPHTPGR TSPAVMQPPP GMPLPSADIA PPPYEPPGHP
VPQPGFVPPH MNADGTYMPA GFYPPPGPHP PMGYYPPGPY PPGSYPGPGG HTATVLVPSG
AATTVTVLQG EIFEGAPVQT VCPHCQQAIT TKISYEIGLM NFVLGFFCCF MGCDLGCCLI
PCLINDFKDV THTCPSCKAY ICTYKRLC