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CDPF1_DANRE
ID   CDPF1_DANRE             Reviewed;          87 AA.
AC   Q5RGZ1; Q08CV5;
DT   10-JUN-2008, integrated into UniProtKB/Swiss-Prot.
DT   21-DEC-2004, sequence version 1.
DT   03-AUG-2022, entry version 73.
DE   RecName: Full=Cysteine-rich DPF motif domain-containing protein 1;
GN   Name=cdpf1; ORFNames=si:ch211-239e6.4, zgc:136265;
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Danionidae; Danioninae; Danio.
OX   NCBI_TaxID=7955;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Tuebingen;
RX   PubMed=23594743; DOI=10.1038/nature12111;
RA   Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA   Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA   Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA   White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA   Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA   Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA   Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA   Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA   Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA   Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA   Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA   Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA   Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA   Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA   Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA   McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA   Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA   Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA   Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA   Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA   Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA   Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA   Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA   Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA   Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA   Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA   Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA   Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA   de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA   Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT   "The zebrafish reference genome sequence and its relationship to the human
RT   genome.";
RL   Nature 496:498-503(2013).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Skin, and Testis;
RG   NIH - Zebrafish Gene Collection (ZGC) project;
RL   Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the CDPF1 family. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAI24073.1; Type=Erroneous termination; Note=Extended C-terminus.; Evidence={ECO:0000305};
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DR   EMBL; BX649425; CAI11870.1; -; Genomic_DNA.
DR   EMBL; BC115061; AAI15062.1; -; mRNA.
DR   EMBL; BC124072; AAI24073.1; ALT_SEQ; mRNA.
DR   RefSeq; NP_001070230.2; NM_001076762.2.
DR   AlphaFoldDB; Q5RGZ1; -.
DR   STRING; 7955.ENSDARP00000114819; -.
DR   PaxDb; Q5RGZ1; -.
DR   Ensembl; ENSDART00000137798; ENSDARP00000114819; ENSDARG00000095705.
DR   Ensembl; ENSDART00000184288; ENSDARP00000145478; ENSDARG00000095705.
DR   GeneID; 563220; -.
DR   KEGG; dre:563220; -.
DR   CTD; 150383; -.
DR   ZFIN; ZDB-GENE-041210-170; cdpf1.
DR   eggNOG; KOG4543; Eukaryota.
DR   GeneTree; ENSGT00390000007925; -.
DR   HOGENOM; CLU_169770_0_0_1; -.
DR   InParanoid; Q5RGZ1; -.
DR   PhylomeDB; Q5RGZ1; -.
DR   TreeFam; TF313933; -.
DR   PRO; PR:Q5RGZ1; -.
DR   Proteomes; UP000000437; Genome assembly.
DR   Proteomes; UP000814640; Chromosome 4.
DR   Bgee; ENSDARG00000095705; Expressed in bone element and 30 other tissues.
DR   ExpressionAtlas; Q5RGZ1; baseline and differential.
DR   InterPro; IPR042426; CDPF1.
DR   InterPro; IPR018785; Cys-rich_DPF.
DR   PANTHER; PTHR31849; PTHR31849; 1.
DR   Pfam; PF10170; C6_DPF; 1.
DR   PRINTS; PR01995; UPF0595.
PE   3: Inferred from homology;
KW   Reference proteome.
FT   CHAIN           1..87
FT                   /note="Cysteine-rich DPF motif domain-containing protein 1"
FT                   /id="PRO_0000341363"
FT   CONFLICT        41
FT                   /note="E -> G (in Ref. 2; AAI24073)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        85
FT                   /note="A -> V (in Ref. 2; AAI24073)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   87 AA;  9518 MW;  55B5A11E094665BA CRC64;
     MDLTEGSALG VFSCQLCEVS SPYSFYGQKP PNTRAIVLLE ECFGIKDPFS PEREKFLILG
     SKCSLCSKTV CVGTVRRSCD SQSEAKL
 
 
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