CDSP_ORYSJ
ID CDSP_ORYSJ Reviewed; 301 AA.
AC Q84NN4; A0A0N7KNF3;
DT 15-JUN-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 131.
DE RecName: Full=Thioredoxin-like protein CDSP32, chloroplastic;
DE AltName: Full=Chloroplastic drought-induced stress protein of 32 KDa;
DE Short=OsCDSP32;
DE Flags: Precursor;
GN Name=CDSP32; OrderedLocusNames=Os07g0476900, LOC_Os07g29410;
GN ORFNames=OsJ_24223, P0640E12.112;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND FUNCTION.
RC STRAIN=cv. Nipponbare;
RX PubMed=16891402; DOI=10.1105/tpc.106.041541;
RA Perez-Ruiz J.M., Spinola M.C., Kirchsteiger K., Moreno J., Sahrawy M.,
RA Cejudo F.J.;
RT "Rice NTRC is a high-efficiency redox system for chloroplast protection
RT against oxidative damage.";
RL Plant Cell 18:2356-2368(2006).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [7]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=19825616; DOI=10.1093/mp/ssn076;
RA Chibani K., Wingsle G., Jacquot J.P., Gelhaye E., Rouhier N.;
RT "Comparative genomic study of the thioredoxin family in photosynthetic
RT organisms with emphasis on Populus trichocarpa.";
RL Mol. Plant 2:308-322(2009).
CC -!- FUNCTION: Thiol-disulfide oxidoreductase that may participate in
CC various redox reactions. May act as electron donor to the BAS1
CC peroxiredoxin. Possesses low insulin disulfide bonds reducing activity.
CC {ECO:0000269|PubMed:16891402}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the thioredoxin family. {ECO:0000305}.
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DR EMBL; AM039890; CAJ01694.1; -; Genomic_DNA.
DR EMBL; AP005261; BAC75581.1; -; Genomic_DNA.
DR EMBL; AP008213; BAF21541.1; -; Genomic_DNA.
DR EMBL; AP014963; BAT01458.1; -; Genomic_DNA.
DR EMBL; CM000144; EAZ39786.1; -; Genomic_DNA.
DR EMBL; AK066045; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015646731.1; XM_015791245.1.
DR AlphaFoldDB; Q84NN4; -.
DR SMR; Q84NN4; -.
DR STRING; 4530.OS07T0476900-01; -.
DR PaxDb; Q84NN4; -.
DR PRIDE; Q84NN4; -.
DR EnsemblPlants; Os07t0476900-01; Os07t0476900-01; Os07g0476900.
DR GeneID; 4343219; -.
DR Gramene; Os07t0476900-01; Os07t0476900-01; Os07g0476900.
DR KEGG; osa:4343219; -.
DR eggNOG; KOG0907; Eukaryota.
DR HOGENOM; CLU_064180_0_0_1; -.
DR InParanoid; Q84NN4; -.
DR OMA; KVPHFTF; -.
DR OrthoDB; 1088692at2759; -.
DR Proteomes; UP000000763; Chromosome 7.
DR Proteomes; UP000007752; Chromosome 7.
DR Proteomes; UP000059680; Chromosome 7.
DR Genevisible; Q84NN4; OS.
DR GO; GO:0009941; C:chloroplast envelope; IEA:EnsemblPlants.
DR GO; GO:0009570; C:chloroplast stroma; IEA:EnsemblPlants.
DR GO; GO:0016671; F:oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; IDA:UniProtKB.
DR GO; GO:0045454; P:cell redox homeostasis; IEA:EnsemblPlants.
DR GO; GO:0042742; P:defense response to bacterium; IEA:EnsemblPlants.
DR GO; GO:0010286; P:heat acclimation; IEA:EnsemblPlants.
DR InterPro; IPR044192; CDSP32.
DR InterPro; IPR036249; Thioredoxin-like_sf.
DR InterPro; IPR013766; Thioredoxin_domain.
DR PANTHER; PTHR47578; PTHR47578; 1.
DR Pfam; PF00085; Thioredoxin; 2.
DR SUPFAM; SSF52833; SSF52833; 2.
PE 2: Evidence at transcript level;
KW Chloroplast; Disulfide bond; Electron transport; Plastid;
KW Redox-active center; Reference proteome; Transit peptide; Transport.
FT TRANSIT 1..47
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 48..301
FT /note="Thioredoxin-like protein CDSP32, chloroplastic"
FT /id="PRO_0000394844"
FT DOMAIN 50..285
FT /note="Thioredoxin"
FT REGION 17..73
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 219
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT ACT_SITE 222
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT SITE 213
FT /note="Deprotonates C-terminal active site Cys"
FT /evidence="ECO:0000250"
FT SITE 220
FT /note="Contributes to redox potential value"
FT /evidence="ECO:0000250"
FT SITE 221
FT /note="Contributes to redox potential value"
FT /evidence="ECO:0000250"
FT DISULFID 219..222
FT /note="Redox-active"
FT /evidence="ECO:0000250"
FT CONFLICT 296
FT /note="N -> S (in Ref. 6; AK066045)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 301 AA; 32155 MW; 779248CDF12B6BFA CRC64;
MASTAAFLST LAGSTSLGGA TPASGGGSGR SKTARFLRRR RRGGAVRAAV SGTEQAPETT
KKKGGGGGGG DERVVQVHSA EELDGALRAA KERLVVVEFA ASHSVNSSRI YPCMVELSRT
CGDVDFLLVM GDESDATREL CRREGITAVP HFTFYKGAEK VHEEEGIGPD QLAGDVLYYG
DHHSAVVQLH SRADVESLIS DHRGEGGKLV VLDVGLKRCG PCVKVYPTVV KLSRTMADTT
VFARMNGDEN DSCMEFLRDM DVVEVPTFLF IRDGDIVGRY VGSGRGELIG EILRYNGVKV
T
