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CDX2_MESAU
ID   CDX2_MESAU              Reviewed;         313 AA.
AC   Q04649;
DT   01-JUN-1994, integrated into UniProtKB/Swiss-Prot.
DT   01-JUN-1994, sequence version 1.
DT   03-AUG-2022, entry version 116.
DE   RecName: Full=Homeobox protein CDX-2;
DE   AltName: Full=Caudal-type homeobox protein 2;
GN   Name=CDX2; Synonyms=CDX-3, CDX3;
OS   Mesocricetus auratus (Golden hamster).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea;
OC   Cricetidae; Cricetinae; Mesocricetus.
OX   NCBI_TaxID=10036;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND TISSUE SPECIFICITY.
RX   PubMed=1358758; DOI=10.1101/gad.6.11.2165;
RA   German M.S., Wang J., Chadwick R.B., Rutter W.J.;
RT   "Synergistic activation of the insulin gene by a LIM-homeo domain protein
RT   and a basic helix-loop-helix protein: building a functional insulin
RT   minienhancer complex.";
RL   Genes Dev. 6:2165-2176(1992).
RN   [2]
RP   FUNCTION.
RX   PubMed=9148757; DOI=10.1042/bj3220833;
RA   Troelsen J.T., Mitchelmore C., Spodsberg N., Jensen A.M., Noren O.,
RA   Sjoestroem H.;
RT   "Regulation of lactase-phlorizin hydrolase gene expression by the caudal-
RT   related homoeodomain protein Cdx-2.";
RL   Biochem. J. 322:833-838(1997).
CC   -!- FUNCTION: Transcription factor which regulates the transcription of
CC       multiple genes expressed in the intestinal epithelium (PubMed:1358758).
CC       Binds to the promoter of the intestinal sucrase-isomaltase SI and
CC       activates SI transcription (By similarity). Binds to the DNA sequence
CC       5'-ATAAAAACTTAT-3' in the promoter region of VDR and activates VDR
CC       transcription (By similarity). Binds to and activates transcription of
CC       LPH (PubMed:9148757). Activates transcription of CLDN2 and intestinal
CC       mucin MUC2 (By similarity). Binds to the 5'-AATTTTTTACAACACCT-3' DNA
CC       sequence in the promoter region of CA1 and activates CA1 transcription
CC       (By similarity). Important in broad range of functions from early
CC       differentiation to maintenance of the intestinal epithelial lining of
CC       both the small and large intestine. Binds preferentially to methylated
CC       DNA (By similarity). {ECO:0000250|UniProtKB:P43241,
CC       ECO:0000250|UniProtKB:Q99626, ECO:0000269|PubMed:1358758,
CC       ECO:0000269|PubMed:9148757}.
CC   -!- SUBUNIT: Can bind DNA as a monomer or homodimer.
CC       {ECO:0000250|UniProtKB:P43241}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:P43241}.
CC   -!- TISSUE SPECIFICITY: Expressed in the intestine.
CC       {ECO:0000269|PubMed:1358758}.
CC   -!- PTM: Ubiquitinated, leading to its degradation by the proteasome.
CC       {ECO:0000250|UniProtKB:P43241}.
CC   -!- PTM: Phosphorylation at Ser-60 reduces transactivation capacity.
CC       Phosphorylation at Ser-283 reduces transactivation capacity and also
CC       increases ubiquitin-dependent proteasome degradation.
CC       {ECO:0000250|UniProtKB:P43241}.
CC   -!- SIMILARITY: Belongs to the Caudal homeobox family. {ECO:0000305}.
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DR   EMBL; X81404; CAA57162.1; -; mRNA.
DR   PIR; A46233; A46233.
DR   RefSeq; NP_001268630.1; NM_001281701.1.
DR   AlphaFoldDB; Q04649; -.
DR   SMR; Q04649; -.
DR   STRING; 10036.XP_005083240.1; -.
DR   GeneID; 101841392; -.
DR   CTD; 1045; -.
DR   eggNOG; KOG0848; Eukaryota.
DR   OrthoDB; 1380804at2759; -.
DR   Proteomes; UP000189706; Unplaced.
DR   GO; GO:0000794; C:condensed nuclear chromosome; IEA:Ensembl.
DR   GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR   GO; GO:0017053; C:transcription repressor complex; IEA:Ensembl.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:UniProtKB.
DR   GO; GO:0001227; F:DNA-binding transcription repressor activity, RNA polymerase II-specific; IEA:Ensembl.
DR   GO; GO:0008327; F:methyl-CpG binding; ISS:UniProtKB.
DR   GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; ISS:UniProtKB.
DR   GO; GO:0009952; P:anterior/posterior pattern specification; IEA:Ensembl.
DR   GO; GO:0001568; P:blood vessel development; IEA:Ensembl.
DR   GO; GO:0008333; P:endosome to lysosome transport; IEA:Ensembl.
DR   GO; GO:0045197; P:establishment or maintenance of epithelial cell apical/basal polarity; IEA:Ensembl.
DR   GO; GO:0060575; P:intestinal epithelial cell differentiation; ISS:UniProtKB.
DR   GO; GO:0060711; P:labyrinthine layer development; IEA:Ensembl.
DR   GO; GO:0045597; P:positive regulation of cell differentiation; IEA:Ensembl.
DR   GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; ISS:UniProtKB.
DR   GO; GO:0014807; P:regulation of somitogenesis; ISS:UniProtKB.
DR   GO; GO:0035019; P:somatic stem cell population maintenance; IEA:Ensembl.
DR   GO; GO:0048863; P:stem cell differentiation; IEA:Ensembl.
DR   GO; GO:0001829; P:trophectodermal cell differentiation; IEA:Ensembl.
DR   CDD; cd00086; homeodomain; 1.
DR   InterPro; IPR006820; Caudal_activation_dom.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR020479; Homeobox_metazoa.
DR   InterPro; IPR000047; HTH_motif.
DR   Pfam; PF04731; Caudal_act; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   PRINTS; PR00024; HOMEOBOX.
DR   PRINTS; PR00031; HTHREPRESSR.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   2: Evidence at transcript level;
KW   Activator; Developmental protein; DNA-binding; Homeobox; Nucleus;
KW   Phosphoprotein; Reference proteome; Transcription;
KW   Transcription regulation; Ubl conjugation.
FT   CHAIN           1..313
FT                   /note="Homeobox protein CDX-2"
FT                   /id="PRO_0000048850"
FT   DNA_BIND        185..244
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00108"
FT   REGION          113..153
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          185..215
FT                   /note="Interaction with DNA"
FT                   /evidence="ECO:0000250|UniProtKB:Q99626"
FT   REGION          227..241
FT                   /note="Interaction with 5-mCpG DNA"
FT                   /evidence="ECO:0000250|UniProtKB:Q99626"
FT   REGION          242..313
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOTIF           283..295
FT                   /note="4S motif; modulates transactivation activity and
FT                   protein stability"
FT                   /evidence="ECO:0000250|UniProtKB:P43241"
FT   COMPBIAS        248..262
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        275..293
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         60
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P43241"
FT   MOD_RES         283
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P43241"
SQ   SEQUENCE   313 AA;  33560 MW;  63C98A9C0DEFD05C CRC64;
     MYVSYLLDKD VSMYPSSVRH SGGLNLAPQN FVSPPQYPDY GGYHVAAAAA AAANLDSAQS
     PGPSWSTAYG APLREDWNGY PPGGAAAANA VAHGLNGGSP AAAMGYSSPA DYHAHHHPHH
     HPHHPAAAPS CASGLLQTLN PGPPGPAATG AAEQLSPSGQ RRNLCEWMRK PAQPSLGSQV
     KTRTKDKYRV VYTDHQRLEL EKEFHYSRYI TIRRKAELAA TLGLSERQVK IWFQNRRAKE
     RKINKKKLQQ QQQQQQQQQL ASPPPQPSQP QPGSLRSVPE PLSPVSSLQG SVPGSVPGVL
     GPAGGVLNPT VTQ
 
 
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