CELF5_XENTR
ID CELF5_XENTR Reviewed; 486 AA.
AC A0JM51;
DT 10-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 12-DEC-2006, sequence version 1.
DT 03-AUG-2022, entry version 66.
DE RecName: Full=CUGBP Elav-like family member 5;
DE Short=CELF-5;
DE AltName: Full=Bruno-like protein 5;
DE AltName: Full=CUG-BP- and ETR-3-like factor 5;
DE AltName: Full=RNA-binding protein BRUNOL-5;
GN Name=celf5; Synonyms=brunol5;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: RNA-binding protein that may be implicated in the regulation
CC of pre-mRNA alternative splicing. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the CELF/BRUNOL family. {ECO:0000305}.
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DR EMBL; BC125739; AAI25740.1; -; mRNA.
DR RefSeq; NP_001090639.1; NM_001097170.1.
DR AlphaFoldDB; A0JM51; -.
DR SMR; A0JM51; -.
DR STRING; 8364.ENSXETP00000058992; -.
DR PaxDb; A0JM51; -.
DR DNASU; 100036604; -.
DR GeneID; 100036604; -.
DR KEGG; xtr:100036604; -.
DR CTD; 60680; -.
DR Xenbase; XB-GENE-494002; celf5.
DR eggNOG; KOG0146; Eukaryota.
DR InParanoid; A0JM51; -.
DR OrthoDB; 1209165at2759; -.
DR Proteomes; UP000008143; Chromosome 1.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000014344; Expressed in brain and 2 other tissues.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:1990904; C:ribonucleoprotein complex; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0006376; P:mRNA splice site selection; IBA:GO_Central.
DR GO; GO:0000381; P:regulation of alternative mRNA splicing, via spliceosome; IBA:GO_Central.
DR CDD; cd12632; RRM1_CELF3_4_5_6; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR034648; CELF3/4/5/6_RRM1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR Pfam; PF00076; RRM_1; 3.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF54928; SSF54928; 2.
DR PROSITE; PS50102; RRM; 3.
PE 2: Evidence at transcript level;
KW Cytoplasm; mRNA processing; Nucleus; Reference proteome; Repeat;
KW RNA-binding.
FT CHAIN 1..486
FT /note="CUGBP Elav-like family member 5"
FT /id="PRO_0000295228"
FT DOMAIN 47..128
FT /note="RRM 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 135..215
FT /note="RRM 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 401..479
FT /note="RRM 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT REGION 1..39
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 486 AA; 52846 MW; BF229DDF448C912B CRC64;
MARLTEREAR RQQQQHPPQQ QQPRACPMSG PEPPAQQSDS MKDLDAIKLF VGQIPRNLEE
KDLKPLFEQF GKIYELTVLK DRYTGMHKGC AFLTYCARDS AIKAQTALHE QKTLPGMARP
IQVKPADSES RGGDRKLFVG MLSKQQSEEE VTSMFQAFGS IEECSVLRGP DGSSKGCAFV
KFSSHAEAQA AIQALHGSQT MPGASSSLVV KFADTDKERT LRRMQQMVGQ LGIFTPSLAL
PISPYSAYAQ ALMQQQTTVL STSHGSYLSP SVAFPSCHIQ QIGAVNLNGL PAAPITPASG
LHSPPVIGTA AVPGLVAPLT NGFPGLVPFP SSHPALDTIY TNSIVPYPAQ SPALTVESLH
PSFTGVQQYS AIYPTAALTP VTHSTPQPPP ILQQREGPEG CNLFIYHLPQ EFGDNELTQM
FLPFGNIISS KVFMDRATNQ SKCFGFVSFD NPSSAQTAIQ AMNGFQIGMK RLKVQLKRPK
DTTQPY