CF176_HUMAN
ID CF176_HUMAN Reviewed; 186 AA.
AC A8K010;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-FEB-2008, sequence version 2.
DT 25-MAY-2022, entry version 45.
DE RecName: Full=Putative transcriptional regulator encoded by LINC00473;
GN Name=LINC00473; Synonyms=C6orf176;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Adrenal gland;
RX PubMed=14702039; DOI=10.1038/ng1285;
RA Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
RA Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
RA Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
RA Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
RA Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H.,
RA Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M.,
RA Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K.,
RA Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T.,
RA Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M.,
RA Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S.,
RA Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H.,
RA Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K.,
RA Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N.,
RA Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
RA Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
RA Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
RA Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
RA Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y.,
RA Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K.,
RA Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T.,
RA Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T.,
RA Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y.,
RA Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H.,
RA Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y.,
RA Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H.,
RA Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O.,
RA Isogai T., Sugano S.;
RT "Complete sequencing and characterization of 21,243 full-length human
RT cDNAs.";
RL Nat. Genet. 36:40-45(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Cervix carcinoma;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [3]
RP FUNCTION, AND INDUCTION.
RX PubMed=22108211; DOI=10.1152/physiolgenomics.00089.2011;
RA Reitmair A., Sachs G., Im W.B., Wheeler L.;
RT "C6orf176: a novel possible regulator of cAMP-mediated gene expression.";
RL Physiol. Genomics 44:152-161(2012).
CC -!- FUNCTION: May play a role in cAMP-mediated gene transcription.
CC {ECO:0000269|PubMed:22108211}.
CC -!- INDUCTION: Up-regulated upon activation of cAMP signaling.
CC {ECO:0000269|PubMed:22108211}.
CC -!- CAUTION: Product of a dubious CDS prediction. May be a non-coding RNA.
CC According to PubMed:22108211, silencing of that gene results in altered
CC transcription of cAMP-responsive genes. However, PubMed:22108211 does
CC not provide evidence that it is due to the absence of the putative
CC protein. {ECO:0000305}.
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DR EMBL; AK289375; BAF82064.1; -; mRNA.
DR EMBL; BC008632; -; NOT_ANNOTATED_CDS; mRNA.
DR AlphaFoldDB; A8K010; -.
DR BioMuta; HGNC:21160; -.
DR MassIVE; A8K010; -.
DR PeptideAtlas; A8K010; -.
DR PRIDE; A8K010; -.
DR ProteomicsDB; 1830; -.
DR GeneCards; LINC00473; -.
DR HGNC; HGNC:21160; LINC00473.
DR neXtProt; NX_A8K010; -.
DR Pharos; A8K010; Tdark.
DR Proteomes; UP000005640; Unplaced.
DR RNAct; A8K010; protein.
DR GO; GO:0006351; P:transcription, DNA-templated; IMP:UniProtKB.
PE 5: Uncertain;
KW Reference proteome.
FT CHAIN 1..186
FT /note="Putative transcriptional regulator encoded by
FT LINC00473"
FT /id="PRO_0000317269"
FT REGION 1..62
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 14..55
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 30
FT /note="R -> Q (in Ref. 1; BAF82064)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 186 AA; 21118 MW; 6CC5BF8FDA023616 CRC64;
MELSAAAGRR RQAPWREFTG RHRTERSQER GSTPRKERSM GSRQPRKRER EPRDCTPTCT
NAASVSRSGA RRAPGCAGRC ITMKNCARAW RELSERACCF QAVPPSNMKQ SWLIFLDTTL
CSAWLLASSC PRLYAPLISF HCMCFNTVLL FPRLFGPTLS AKIQFNTDLS LRAIAWKCTK
DTTTYC