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CFAI_RAT
ID   CFAI_RAT                Reviewed;         604 AA.
AC   Q9WUW3; Q5EBC4;
DT   04-MAY-2001, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1999, sequence version 1.
DT   03-AUG-2022, entry version 141.
DE   RecName: Full=Complement factor I;
DE            EC=3.4.21.45;
DE   AltName: Full=C3B/C4B inactivator;
DE   Contains:
DE     RecName: Full=Complement factor I heavy chain;
DE   Contains:
DE     RecName: Full=Complement factor I light chain;
DE   Flags: Precursor;
GN   Name=Cfi; Synonyms=If;
OS   Rattus norvegicus (Rat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Rattus.
OX   NCBI_TaxID=10116;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RC   STRAIN=Sprague-Dawley; TISSUE=Liver;
RX   PubMed=10583609; DOI=10.1046/j.1365-2567.1999.00886.x;
RA   Schlaf G., Rothermel E., Oppermann M., Schieferdecker H.L., Jungermann K.,
RA   Gotze O.;
RT   "Rat complement factor I: molecular cloning, sequencing and expression in
RT   tissues and isolated cells.";
RL   Immunology 98:464-474(1999).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Liver;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
CC   -!- FUNCTION: Trypsin-like serine protease that plays an essential role in
CC       regulating the immune response by controlling all complement pathways.
CC       Inhibits these pathways by cleaving three peptide bonds in the alpha-
CC       chain of C3b and two bonds in the alpha-chain of C4b thereby
CC       inactivating these proteins. Essential cofactors for these reactions
CC       include factor H and C4BP in the fluid phase and membrane cofactor
CC       protein/CD46 and CR1 on cell surfaces. The presence of these cofactors
CC       on healthy cells allows degradation of deposited C3b by CFI in order to
CC       prevent undesired complement activation, while in apoptotic cells or
CC       microbes, the absence of such cofactors leads to C3b-mediated
CC       complement activation and subsequent opsonization.
CC       {ECO:0000250|UniProtKB:P05156}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Inactivates complement subcomponents C3b, iC3b and C4b by
CC         proteolytic cleavage.; EC=3.4.21.45;
CC   -!- SUBUNIT: Heterodimer of a light and heavy chains; disulfide-linked. The
CC       fully processed and mature protein circulates as a zymogen, and is
CC       allosterically activated by substrate-induced remodeling of the active
CC       site. Interacts with C3b. Interacts with complement factor H.
CC       {ECO:0000250|UniProtKB:P05156}.
CC   -!- SUBCELLULAR LOCATION: Secreted, extracellular space
CC       {ECO:0000250|UniProtKB:P05156}.
CC   -!- TISSUE SPECIFICITY: Expressed in the liver by hepatocytes. Also present
CC       in other cells such as monocytes, fibroblasts or keratinocytes.
CC       {ECO:0000250|UniProtKB:P05156}.
CC   -!- SIMILARITY: Belongs to the peptidase S1 family. {ECO:0000255|PROSITE-
CC       ProRule:PRU00274}.
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DR   EMBL; Y18965; CAB41688.1; -; mRNA.
DR   EMBL; BC089798; AAH89798.1; -; mRNA.
DR   RefSeq; NP_077071.1; NM_024157.1.
DR   AlphaFoldDB; Q9WUW3; -.
DR   SMR; Q9WUW3; -.
DR   STRING; 10116.ENSRNOP00000032881; -.
DR   MEROPS; S01.199; -.
DR   GlyGen; Q9WUW3; 6 sites.
DR   iPTMnet; Q9WUW3; -.
DR   PhosphoSitePlus; Q9WUW3; -.
DR   PaxDb; Q9WUW3; -.
DR   PRIDE; Q9WUW3; -.
DR   GeneID; 79126; -.
DR   KEGG; rno:79126; -.
DR   UCSC; RGD:620429; rat.
DR   CTD; 3426; -.
DR   RGD; 620429; Cfi.
DR   eggNOG; KOG3627; Eukaryota.
DR   InParanoid; Q9WUW3; -.
DR   OrthoDB; 1314811at2759; -.
DR   PhylomeDB; Q9WUW3; -.
DR   Reactome; R-RNO-977606; Regulation of Complement cascade.
DR   PRO; PR:Q9WUW3; -.
DR   Proteomes; UP000002494; Unplaced.
DR   GO; GO:0005615; C:extracellular space; IDA:RGD.
DR   GO; GO:0016020; C:membrane; IEA:InterPro.
DR   GO; GO:0005634; C:nucleus; IDA:RGD.
DR   GO; GO:1905370; C:serine-type endopeptidase complex; ISO:RGD.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0005044; F:scavenger receptor activity; IEA:InterPro.
DR   GO; GO:0004252; F:serine-type endopeptidase activity; IEA:UniProtKB-EC.
DR   GO; GO:0071354; P:cellular response to interleukin-6; IEP:RGD.
DR   GO; GO:0006956; P:complement activation; ISO:RGD.
DR   GO; GO:0006958; P:complement activation, classical pathway; IEA:UniProtKB-KW.
DR   GO; GO:0045087; P:innate immune response; IEA:UniProtKB-KW.
DR   GO; GO:0006508; P:proteolysis; ISO:RGD.
DR   GO; GO:0030451; P:regulation of complement activation, alternative pathway; ISO:RGD.
DR   CDD; cd00112; LDLa; 2.
DR   CDD; cd00190; Tryp_SPc; 1.
DR   Gene3D; 2.40.10.10; -; 1.
DR   Gene3D; 3.10.250.10; -; 1.
DR   Gene3D; 4.10.400.10; -; 2.
DR   InterPro; IPR003884; FacI_MAC.
DR   InterPro; IPR002350; Kazal_dom.
DR   InterPro; IPR036058; Kazal_dom_sf.
DR   InterPro; IPR036055; LDL_receptor-like_sf.
DR   InterPro; IPR023415; LDLR_class-A_CS.
DR   InterPro; IPR002172; LDrepeatLR_classA_rpt.
DR   InterPro; IPR009003; Peptidase_S1_PA.
DR   InterPro; IPR043504; Peptidase_S1_PA_chymotrypsin.
DR   InterPro; IPR001314; Peptidase_S1A.
DR   InterPro; IPR001190; SRCR.
DR   InterPro; IPR017448; SRCR-like_dom.
DR   InterPro; IPR036772; SRCR-like_dom_sf.
DR   InterPro; IPR001254; Trypsin_dom.
DR   InterPro; IPR018114; TRYPSIN_HIS.
DR   InterPro; IPR033116; TRYPSIN_SER.
DR   Pfam; PF07648; Kazal_2; 1.
DR   Pfam; PF00057; Ldl_recept_a; 2.
DR   Pfam; PF00530; SRCR; 1.
DR   Pfam; PF00089; Trypsin; 1.
DR   PRINTS; PR00722; CHYMOTRYPSIN.
DR   SMART; SM00057; FIMAC; 1.
DR   SMART; SM00280; KAZAL; 1.
DR   SMART; SM00192; LDLa; 2.
DR   SMART; SM00202; SR; 1.
DR   SMART; SM00020; Tryp_SPc; 1.
DR   SUPFAM; SSF100895; SSF100895; 1.
DR   SUPFAM; SSF50494; SSF50494; 1.
DR   SUPFAM; SSF56487; SSF56487; 1.
DR   SUPFAM; SSF57424; SSF57424; 2.
DR   PROSITE; PS51465; KAZAL_2; 1.
DR   PROSITE; PS01209; LDLRA_1; 1.
DR   PROSITE; PS50068; LDLRA_2; 2.
DR   PROSITE; PS50287; SRCR_2; 1.
DR   PROSITE; PS50240; TRYPSIN_DOM; 1.
DR   PROSITE; PS00134; TRYPSIN_HIS; 1.
DR   PROSITE; PS00135; TRYPSIN_SER; 1.
PE   2: Evidence at transcript level;
KW   Calcium; Cleavage on pair of basic residues; Complement pathway;
KW   Disulfide bond; Glycoprotein; Hydrolase; Immunity; Innate immunity;
KW   Metal-binding; Protease; Reference proteome; Repeat; Secreted;
KW   Serine protease; Signal.
FT   SIGNAL          1..18
FT                   /evidence="ECO:0000255"
FT   CHAIN           19..604
FT                   /note="Complement factor I"
FT                   /id="PRO_0000027574"
FT   CHAIN           19..357
FT                   /note="Complement factor I heavy chain"
FT                   /id="PRO_0000027575"
FT   CHAIN           362..604
FT                   /note="Complement factor I light chain"
FT                   /id="PRO_0000027576"
FT   DOMAIN          58..111
FT                   /note="Kazal-like"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00798"
FT   DOMAIN          117..217
FT                   /note="SRCR"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00196"
FT   DOMAIN          218..262
FT                   /note="LDL-receptor class A 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00124"
FT   DOMAIN          263..299
FT                   /note="LDL-receptor class A 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00124"
FT   DOMAIN          362..595
FT                   /note="Peptidase S1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00274"
FT   ACT_SITE        402
FT                   /note="Charge relay system"
FT                   /evidence="ECO:0000250|UniProtKB:P00750"
FT   ACT_SITE        450
FT                   /note="Charge relay system"
FT                   /evidence="ECO:0000250|UniProtKB:P00750"
FT   ACT_SITE        546
FT                   /note="Charge relay system"
FT                   /evidence="ECO:0000250|UniProtKB:P00750"
FT   BINDING         244
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   BINDING         247
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   BINDING         249
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   BINDING         251
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   BINDING         257
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   BINDING         258
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   BINDING         284
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   BINDING         286
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   BINDING         288
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   BINDING         294
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   BINDING         295
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   CARBOHYD        40
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        106
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        116
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        182
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        515
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        557
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   DISULFID        36..260
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        46..57
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        51..62
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        64..96
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        70..89
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        78..109
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        144..186
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        157..219
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        191..201
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        234..252
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        246..261
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        264..276
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        271..289
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        283..298
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        349..474
FT                   /note="Interchain (between heavy and light chains)"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00124,
FT                   ECO:0000255|PROSITE-ProRule:PRU00196, ECO:0000255|PROSITE-
FT                   ProRule:PRU00274, ECO:0000255|PROSITE-ProRule:PRU00798"
FT   DISULFID        387..403
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        395..465
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        474
FT                   /note="Interchain (with C-327)"
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        488..552
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        516..531
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
FT   DISULFID        542..571
FT                   /evidence="ECO:0000250|UniProtKB:P05156"
SQ   SEQUENCE   604 AA;  67298 MW;  C775AE68D2D52D51 CRC64;
     MKLALLILLL LNPHLSSSKN TPASGQPQED LVEQKCLLKN YTHHSCDKVF CQPWQKCIEG
     TCACKLPYQC PKAGTPVCAT NGRGYPTYCH LKSFECLHPE IKFSNNGTCT AEEKFNVSLI
     YGSTDTEGIV QVKLVDQDEK MFICKNSWST VEANVACFDL GFPLGVRDIQ GRFNIPVNHK
     INSTECLHVR CQGVETSLAE CTFTKKSSKA PHGLAGVVCY TQDADFPTSQ SFQCVNGKRI
     PQEKACDGVN DCGDQSDELC CKGCRGQAFL CKSGVCIPNQ RKCNGEVDCI TGEDESGCEE
     DKKNKIHKGL ARSDQGGETE IETEETEMLT PDMDTERKRI KSLLPKLSCG VKRNTHIRRK
     RVVGGKPAEM GDYPWQVAIK DGDRITCGGI YIGGCWILTA AHCVRPSRYR NYQVWTSLLD
     WLKPNSQLAV QGVSRVVVHE KYNGATYQND IALVEMKKHP GKKECELINS VPACVPWSPY
     LFQPNDRCII SGWGREKDNQ KVYSLRWGEV DLIGNCSRFY PGRYYEKEMQ CAGTSDGSID
     ACKGDSGGPL VCKDVNNVTY VWGIVSWGEN CGKPEFPGVY TRVASYFDWI SYYVGRPLVS
     QYNV
 
 
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