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CGNL1_MOUSE
ID   CGNL1_MOUSE             Reviewed;        1298 AA.
AC   Q6AW69; Q5U5U0; Q69ZB4; Q8BLZ5; Q8BZ26; Q9D2T3;
DT   04-DEC-2007, integrated into UniProtKB/Swiss-Prot.
DT   04-DEC-2007, sequence version 2.
DT   25-MAY-2022, entry version 101.
DE   RecName: Full=Cingulin-like protein 1;
DE   AltName: Full=Junction-associated coiled-coil protein;
GN   Name=Cgnl1; Synonyms=Jacop, Kiaa1749;
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), FUNCTION, SUBUNIT, SUBCELLULAR
RP   LOCATION, TISSUE SPECIFICITY, AND DOMAIN.
RX   PubMed=15292197; DOI=10.1074/jbc.m402616200;
RA   Ohnishi H., Nakahara T., Furuse K., Sasaki H., Tsukita S., Furuse M.;
RT   "JACOP, a novel plaque protein localizing at the apical junctional complex
RT   with sequence similarity to cingulin.";
RL   J. Biol. Chem. 279:46014-46022(2004).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), NUCLEOTIDE SEQUENCE
RP   [LARGE SCALE MRNA] OF 1-640 (ISOFORM 5), AND NUCLEOTIDE SEQUENCE [LARGE
RP   SCALE MRNA] OF 1-641 (ISOFORM 4).
RC   STRAIN=C57BL/6J; TISSUE=Aorta, Testis, Vagina, and Vein;
RX   PubMed=16141072; DOI=10.1126/science.1112014;
RA   Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA   Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA   Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA   Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA   Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA   Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA   Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA   Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA   Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA   Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA   Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA   Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA   Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA   Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA   Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA   Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA   Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA   Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA   Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA   Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA   Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA   Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA   Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA   Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA   Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA   van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA   Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA   Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA   Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA   Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA   Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA   Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA   Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA   Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT   "The transcriptional landscape of the mammalian genome.";
RL   Science 309:1559-1563(2005).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), AND NUCLEOTIDE SEQUENCE
RP   [LARGE SCALE MRNA] OF 804-1298 (ISOFORM 1).
RC   STRAIN=FVB/N; TISSUE=Mammary tumor, and Salivary gland;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 305-1298 (ISOFORM 3).
RC   TISSUE=Embryonic intestine;
RX   PubMed=15368895; DOI=10.1093/dnares/11.3.205;
RA   Okazaki N., Kikuno R., Ohara R., Inamoto S., Koseki H., Hiraoka S.,
RA   Saga Y., Seino S., Nishimura M., Kaisho T., Hoshino K., Kitamura H.,
RA   Nagase T., Ohara O., Koga H.;
RT   "Prediction of the coding sequences of mouse homologues of KIAA gene: IV.
RT   The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs
RT   identified by screening of terminal sequences of cDNA clones randomly
RT   sampled from size-fractionated libraries.";
RL   DNA Res. 11:205-218(2004).
RN   [5]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-284 AND SER-298, AND
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Liver;
RX   PubMed=17242355; DOI=10.1073/pnas.0609836104;
RA   Villen J., Beausoleil S.A., Gerber S.A., Gygi S.P.;
RT   "Large-scale phosphorylation analysis of mouse liver.";
RL   Proc. Natl. Acad. Sci. U.S.A. 104:1488-1493(2007).
RN   [6]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-203; SER-257; SER-284 AND
RP   SER-679, AND IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Brain, Brown adipose tissue, Heart, Kidney, Liver, Lung, Pancreas,
RC   and Spleen;
RX   PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
RA   Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
RA   Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
RT   "A tissue-specific atlas of mouse protein phosphorylation and expression.";
RL   Cell 143:1174-1189(2010).
CC   -!- FUNCTION: May be involved in anchoring the apical junctional complex,
CC       especially tight junctions, to actin-based cytoskeletons.
CC       {ECO:0000269|PubMed:15292197}.
CC   -!- SUBUNIT: Homodimer or oligomer (Probable). Interacts with CD2AP and
CC       SH3BP1; probably part of a complex at cell junctions (By similarity).
CC       {ECO:0000250|UniProtKB:Q0VF96, ECO:0000305|PubMed:15292197}.
CC   -!- SUBCELLULAR LOCATION: Cell junction, tight junction
CC       {ECO:0000269|PubMed:15292197}. Note=Localizes to the apical junction
CC       complex composed of tight and adherens junctions. In the liver and
CC       kidney, it is also found along non-junctional actin filament bundles in
CC       addition to the apical junction. {ECO:0000269|PubMed:15292197}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=5;
CC       Name=1;
CC         IsoId=Q6AW69-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q6AW69-2; Sequence=VSP_029947;
CC       Name=3;
CC         IsoId=Q6AW69-3; Sequence=VSP_029948, VSP_029950;
CC       Name=4;
CC         IsoId=Q6AW69-4; Sequence=VSP_029948;
CC       Name=5;
CC         IsoId=Q6AW69-5; Sequence=VSP_029948, VSP_029949;
CC   -!- TISSUE SPECIFICITY: Widely expressed. Highly expressed in the kidney
CC       and lung. {ECO:0000269|PubMed:15292197}.
CC   -!- DOMAIN: The head region is responsible for both junction and actin
CC       filament-based distribution. {ECO:0000269|PubMed:15292197}.
CC   -!- SIMILARITY: Belongs to the cingulin family. {ECO:0000305}.
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DR   EMBL; AB186125; BAD34967.1; -; mRNA.
DR   EMBL; AK018850; BAB31463.1; -; mRNA.
DR   EMBL; AK036871; BAC29612.1; -; mRNA.
DR   EMBL; AK040774; BAC30701.2; -; mRNA.
DR   EMBL; BC031499; AAH31499.1; -; mRNA.
DR   EMBL; BC039211; AAH39211.1; -; mRNA.
DR   EMBL; AK173252; BAD32530.1; -; mRNA.
DR   CCDS; CCDS23328.1; -. [Q6AW69-4]
DR   RefSeq; NP_001291291.1; NM_001304362.1.
DR   RefSeq; NP_080875.3; NM_026599.5.
DR   AlphaFoldDB; Q6AW69; -.
DR   SMR; Q6AW69; -.
DR   BioGRID; 212704; 3.
DR   STRING; 10090.ENSMUSP00000072672; -.
DR   iPTMnet; Q6AW69; -.
DR   PhosphoSitePlus; Q6AW69; -.
DR   jPOST; Q6AW69; -.
DR   MaxQB; Q6AW69; -.
DR   PaxDb; Q6AW69; -.
DR   PeptideAtlas; Q6AW69; -.
DR   PRIDE; Q6AW69; -.
DR   ProteomicsDB; 283895; -. [Q6AW69-1]
DR   ProteomicsDB; 283896; -. [Q6AW69-2]
DR   ProteomicsDB; 283897; -. [Q6AW69-3]
DR   ProteomicsDB; 283898; -. [Q6AW69-4]
DR   ProteomicsDB; 283899; -. [Q6AW69-5]
DR   GeneID; 68178; -.
DR   KEGG; mmu:68178; -.
DR   UCSC; uc009qpb.2; mouse. [Q6AW69-2]
DR   CTD; 84952; -.
DR   MGI; MGI:1915428; Cgnl1.
DR   eggNOG; ENOG502QSXG; Eukaryota.
DR   InParanoid; Q6AW69; -.
DR   OrthoDB; 110948at2759; -.
DR   PhylomeDB; Q6AW69; -.
DR   BioGRID-ORCS; 68178; 2 hits in 58 CRISPR screens.
DR   ChiTaRS; Cgnl1; mouse.
DR   PRO; PR:Q6AW69; -.
DR   Proteomes; UP000000589; Unplaced.
DR   RNAct; Q6AW69; protein.
DR   GO; GO:0015629; C:actin cytoskeleton; IDA:MGI.
DR   GO; GO:0043296; C:apical junction complex; IDA:MGI.
DR   GO; GO:0005923; C:bicellular tight junction; IDA:MGI.
DR   GO; GO:0016459; C:myosin complex; IEA:InterPro.
DR   GO; GO:0032991; C:protein-containing complex; ISO:MGI.
DR   GO; GO:0007015; P:actin filament organization; ISS:UniProtKB.
DR   GO; GO:0051058; P:negative regulation of small GTPase mediated signal transduction; ISS:UniProtKB.
DR   GO; GO:0051497; P:negative regulation of stress fiber assembly; ISO:MGI.
DR   GO; GO:0150105; P:protein localization to cell-cell junction; ISO:MGI.
DR   InterPro; IPR002928; Myosin_tail.
DR   Pfam; PF01576; Myosin_tail_1; 1.
PE   1: Evidence at protein level;
KW   Alternative splicing; Cell junction; Coiled coil; Phosphoprotein;
KW   Reference proteome; Tight junction.
FT   CHAIN           1..1298
FT                   /note="Cingulin-like protein 1"
FT                   /id="PRO_0000312876"
FT   REGION          1..551
FT                   /note="Head"
FT   REGION          161..208
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          245..306
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          363..396
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          428..468
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          587..609
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1260..1298
FT                   /note="Tail"
FT   COILED          605..1252
FT                   /evidence="ECO:0000255"
FT   MOTIF           37..51
FT                   /note="ZIM"
FT                   /evidence="ECO:0000250"
FT   COMPBIAS        161..175
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        178..208
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        255..269
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        363..390
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         113
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q0VF96"
FT   MOD_RES         203
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         257
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         284
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:17242355,
FT                   ECO:0007744|PubMed:21183079"
FT   MOD_RES         298
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:17242355"
FT   MOD_RES         299
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q0VF96"
FT   MOD_RES         389
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q0VF96"
FT   MOD_RES         392
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q0VF96"
FT   MOD_RES         483
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q0VF96"
FT   MOD_RES         679
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         705
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q0VF96"
FT   VAR_SEQ         1..1184
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:15489334,
FT                   ECO:0000303|PubMed:16141072"
FT                   /id="VSP_029947"
FT   VAR_SEQ         450
FT                   /note="Missing (in isoform 3, isoform 4 and isoform 5)"
FT                   /evidence="ECO:0000303|PubMed:15368895,
FT                   ECO:0000303|PubMed:16141072"
FT                   /id="VSP_029948"
FT   VAR_SEQ         633..635
FT                   /note="Missing (in isoform 5)"
FT                   /evidence="ECO:0000303|PubMed:16141072"
FT                   /id="VSP_029949"
FT   VAR_SEQ         728..798
FT                   /note="Missing (in isoform 3)"
FT                   /evidence="ECO:0000303|PubMed:15368895"
FT                   /id="VSP_029950"
FT   CONFLICT        464
FT                   /note="K -> I (in Ref. 2; BAC29612)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        529
FT                   /note="S -> G (in Ref. 1; BAD34967)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        902
FT                   /note="Q -> R (in Ref. 4; BAD32530)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        948
FT                   /note="Q -> E (in Ref. 4; BAD32530)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   1298 AA;  148231 MW;  535EDD1B752B3752 CRC64;
     MELYFGEYQH VQQEYGVHLR LASGDTPKPR NSQPSKAGSY GVSIRVQGID GHPYIVLNNT
     ERCLAGTPFP ENAPSFPSSV INNLSLHPSN GTVLKENTPE ELQLPENPYL QTSPLRGQKQ
     FSLHEGRNGV LERKDGPTKL PHVLNFQRHP ELLQPYDPEK NEVNAKKHHP PESPWLRNAT
     EDGTNCKKSR NCFPKSYGSQ PNSPTSEDLA KTNMTAIRLC SSVVIEDPQK QTSVCVNVQR
     CAKEGVGEET LSPRRKSPTA PSPQAYSETK KNRPDVLPFR RQDSAGPILD GARSRRSSSS
     STTPTSATSL YKFLLDDQEC AIHADSVNRH ENRRYIPFLP GTGRDIDTCS IPGVDQLIEK
     FDQKPGLQRR GRSGKRNRIN PDDRKRSRSV DSAFPFGLQG NTEYLTEFSR NLGKSSEHLL
     RPSQVFPQRS VAQEHRGKHS PSSPPAKLQG GAQGAHPKPP LQNKDGKVLN KGRQESTGAC
     APSLPAPNKK EEEIKIATAT LMLQNRAVAA TSDSGAKKIS VKTFPSDSST QATPDLLKGQ
     QELTQQTNEE TAKQILYNYL KEGGTDNEDA TKRKVNLVFE KIQTLKSRAA GSAQGSNQAP
     NSPSEGNSLL DQKNKLILEV SELQQQLQLE MKNQQNIKEE RERMREDLEE LRVRHQSQVE
     ETATLQRRLE ESEGELRKSL EELFQVKMER EQHQTEIRDL QDQLSEMHDE LDSTKRSEDR
     EKGALIEELL QAKQDLQDLL IAKEEQEDLL RKRERELTAL KGALKEEVSS HDQEMDKLKE
     QYDAELQAFR ESVEEATKNV EVLASRSNSS EQSQAEADLR EKVLKEENEK LQGRIAELER
     RAAQLQRQME DVKGDEAQAK ETLRKCESEV QQLEEALVHA RKEEKEATCA RRALEKELEQ
     AQRELSQVSQ EQKELLEKLR DEAEQKEQLR KLKNEMESER WHLDKTIQKL QKEMADIAEA
     SRTSSLELQK QLGEYKEKNR RELAEMQTQL KEKCLEVEKA RLAASKMQDE LRLKEEELQD
     YQRAEEEALT KRQLLEQSLK DLEYELEAKS HLKDDRSRLI KQMEDKVSQL EIELEEERTN
     ADLLSERITW SREQMEQMRS ELLQEKAAKQ DLECDKISLE RQNKDLKSRI IHLEGSYRSS
     KEGLVVQMEA RIAELEDRLE NEERDRANLQ LSNRRLERKV KELVMQVDDE HLSLTDQKDQ
     LSLRLKAMKR QVEEAEEEID RLESSKKKLQ RELEEQMGVN EQLQGQLNSL KKGLRLKTLS
     SKVLDDSDDD DLSSDAGSLY EAPLSYAFPK DSTIASQI
 
 
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