CGS2_ARATH
ID CGS2_ARATH Reviewed; 412 AA.
AC Q9C876; Q9C816;
DT 07-JAN-2015, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 124.
DE RecName: Full=Probable cystathionine gamma-synthase 2 {ECO:0000305};
DE EC=2.5.1.48 {ECO:0000250|UniProtKB:P55217};
GN Name=CGS2 {ECO:0000305};
GN OrderedLocusNames=At1g33320 {ECO:0000312|Araport:AT1G33320};
GN ORFNames=F10C21.1 {ECO:0000312|EMBL:AAG51206.1},
GN T16O9.8 {ECO:0000312|EMBL:AAG51279.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- FUNCTION: Catalyzes the first committed step of methionine (Met)
CC biosynthesis. Catalyzes the formation of L-cystathionine from
CC homoserine esters and L-cysteine, via a gamma-replacement reaction.
CC {ECO:0000250|UniProtKB:P55217}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=L-cysteine + O-succinyl-L-homoserine = H(+) + L,L-
CC cystathionine + succinate; Xref=Rhea:RHEA:20397, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:30031, ChEBI:CHEBI:35235, ChEBI:CHEBI:57661,
CC ChEBI:CHEBI:58161; EC=2.5.1.48;
CC Evidence={ECO:0000250|UniProtKB:P55217};
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000250|UniProtKB:P55217};
CC Note=Binds 1 pyridoxal 5'-phosphate per subunit.
CC {ECO:0000250|UniProtKB:P55217};
CC -!- PATHWAY: Amino-acid biosynthesis; L-methionine biosynthesis via de novo
CC pathway; L-cystathionine from O-succinyl-L-homoserine: step 1/1.
CC {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the trans-sulfuration enzymes family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG51206.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AC027035; AAG51279.1; -; Genomic_DNA.
DR EMBL; AC051630; AAG51206.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002684; AEE31583.1; -; Genomic_DNA.
DR PIR; H86456; H86456.
DR RefSeq; NP_001321971.1; NM_001333034.1.
DR RefSeq; NP_174600.1; NM_103059.2.
DR AlphaFoldDB; Q9C876; -.
DR SMR; Q9C876; -.
DR STRING; 3702.AT1G33320.1; -.
DR PaxDb; Q9C876; -.
DR PRIDE; Q9C876; -.
DR ProMEX; Q9C876; -.
DR EnsemblPlants; AT1G33320.1; AT1G33320.1; AT1G33320.
DR GeneID; 840226; -.
DR Gramene; AT1G33320.1; AT1G33320.1; AT1G33320.
DR KEGG; ath:AT1G33320; -.
DR Araport; AT1G33320; -.
DR TAIR; locus:2006887; AT1G33320.
DR eggNOG; KOG0053; Eukaryota.
DR HOGENOM; CLU_018986_1_0_1; -.
DR InParanoid; Q9C876; -.
DR OrthoDB; 572061at2759; -.
DR PhylomeDB; Q9C876; -.
DR BioCyc; ARA:AT1G33320-MON; -.
DR UniPathway; UPA00051; UER00077.
DR PRO; PR:Q9C876; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C876; baseline and differential.
DR Genevisible; Q9C876; AT.
DR GO; GO:0003962; F:cystathionine gamma-synthase activity; IEA:UniProtKB-EC.
DR GO; GO:0102028; F:cystathionine gamma-synthase activity (acts on O-phosphohomoserine); IEA:UniProtKB-EC.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0009086; P:methionine biosynthetic process; IEA:UniProtKB-KW.
DR GO; GO:0019346; P:transsulfuration; IEA:InterPro.
DR CDD; cd00614; CGS_like; 1.
DR Gene3D; 3.40.640.10; -; 1.
DR Gene3D; 3.90.1150.10; -; 1.
DR InterPro; IPR044639; CGS1/2.
DR InterPro; IPR000277; Cys/Met-Metab_PyrdxlP-dep_enz.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR015422; PyrdxlP-dep_Trfase_small.
DR PANTHER; PTHR43379; PTHR43379; 1.
DR Pfam; PF01053; Cys_Met_Meta_PP; 1.
DR PIRSF; PIRSF001434; CGS; 1.
DR SUPFAM; SSF53383; SSF53383; 1.
DR PROSITE; PS00868; CYS_MET_METAB_PP; 1.
PE 3: Inferred from homology;
KW Amino-acid biosynthesis; Methionine biosynthesis; Pyridoxal phosphate;
KW Reference proteome; Transferase.
FT CHAIN 1..412
FT /note="Probable cystathionine gamma-synthase 2"
FT /id="PRO_0000431692"
FT MOD_RES 229
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000250|UniProtKB:P53780"
SQ SEQUENCE 412 AA; 46004 MW; 6C9B1A47530CB41C CRC64;
MQILKENASN QRFVTRESEV NRICCGFNGF QLGERLRRDM KTSSITTLVV NTTTYFFKDT
TELIDFKEKR IDLYEYARYG NPTTMALEEK ISVLEGAEST LVMASGMYAS NVMLLALVPT
NGHIVATKDC YKETRIFMEN FLTKLGITVT FIDSDDIAGL QTLVNNHEVS LFFTESPTNP
FLRCVDIKLV SKICHRRGTL VCIDATIATP INQKTLALGA DLVHHSATKY IGGHNDFLAG
SISGSMELVS KIRNLHKLLG GTLNPNAAYL LIRGMKTMHL RVRQQNSTGM KMAQVLEAHP
KVSRVYYLGL PSHPEHLIAK RQMTGIGGLI SFEIDGDLKT TIKFIDALKI PYLAASFGGC
ESLVDQLATG IWDIPREERL KDGFQDNLVR FSFGIEDFED IKADVLQALE TI