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CHDC_STAES
ID   CHDC_STAES              Reviewed;         249 AA.
AC   Q8CTQ2;
DT   10-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2003, sequence version 1.
DT   03-AUG-2022, entry version 90.
DE   RecName: Full=Coproheme decarboxylase {ECO:0000255|HAMAP-Rule:MF_01442};
DE            EC=1.3.98.5 {ECO:0000255|HAMAP-Rule:MF_01442};
DE   AltName: Full=Coproheme III oxidative decarboxylase {ECO:0000255|HAMAP-Rule:MF_01442};
DE   AltName: Full=Hydrogen peroxide-dependent heme synthase {ECO:0000255|HAMAP-Rule:MF_01442};
GN   Name=chdC {ECO:0000255|HAMAP-Rule:MF_01442}; OrderedLocusNames=SE_0358;
OS   Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae;
OC   Staphylococcus.
OX   NCBI_TaxID=176280;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 12228 / FDA PCI 1200;
RX   PubMed=12950922; DOI=10.1046/j.1365-2958.2003.03671.x;
RA   Zhang Y.-Q., Ren S.-X., Li H.-L., Wang Y.-X., Fu G., Yang J., Qin Z.-Q.,
RA   Miao Y.-G., Wang W.-Y., Chen R.-S., Shen Y., Chen Z., Yuan Z.-H.,
RA   Zhao G.-P., Qu D., Danchin A., Wen Y.-M.;
RT   "Genome-based analysis of virulence genes in a non-biofilm-forming
RT   Staphylococcus epidermidis strain (ATCC 12228).";
RL   Mol. Microbiol. 49:1577-1593(2003).
CC   -!- FUNCTION: Involved in coproporphyrin-dependent heme b biosynthesis.
CC       Catalyzes the decarboxylation of Fe-coproporphyrin III (coproheme) to
CC       heme b (protoheme IX), the last step of the pathway. The reaction
CC       occurs in a stepwise manner with a three-propionate intermediate.
CC       {ECO:0000255|HAMAP-Rule:MF_01442}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Fe-coproporphyrin III + 2 H(+) + 2 H2O2 = 2 CO2 + 4 H2O + heme
CC         b; Xref=Rhea:RHEA:56516, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
CC         ChEBI:CHEBI:16240, ChEBI:CHEBI:16526, ChEBI:CHEBI:60344,
CC         ChEBI:CHEBI:68438; EC=1.3.98.5; Evidence={ECO:0000255|HAMAP-
CC         Rule:MF_01442};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:56517;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_01442};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Fe-coproporphyrin III + H(+) + H2O2 = CO2 + 2 H2O +
CC         harderoheme III; Xref=Rhea:RHEA:57940, ChEBI:CHEBI:15377,
CC         ChEBI:CHEBI:15378, ChEBI:CHEBI:16240, ChEBI:CHEBI:16526,
CC         ChEBI:CHEBI:68438, ChEBI:CHEBI:142463; Evidence={ECO:0000255|HAMAP-
CC         Rule:MF_01442};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:57941;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_01442};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=H(+) + H2O2 + harderoheme III = CO2 + 2 H2O + heme b;
CC         Xref=Rhea:RHEA:57944, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
CC         ChEBI:CHEBI:16240, ChEBI:CHEBI:16526, ChEBI:CHEBI:60344,
CC         ChEBI:CHEBI:142463; Evidence={ECO:0000255|HAMAP-Rule:MF_01442};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:57945;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_01442};
CC   -!- COFACTOR:
CC       Name=Fe-coproporphyrin III; Xref=ChEBI:CHEBI:68438;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_01442};
CC       Note=Fe-coproporphyrin III acts as both substrate and redox cofactor.
CC       {ECO:0000255|HAMAP-Rule:MF_01442};
CC   -!- PATHWAY: Porphyrin-containing compound metabolism; protoheme
CC       biosynthesis. {ECO:0000255|HAMAP-Rule:MF_01442}.
CC   -!- SIMILARITY: Belongs to the ChdC family. Type 1 subfamily.
CC       {ECO:0000255|HAMAP-Rule:MF_01442}.
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DR   EMBL; AE015929; AAO03955.1; -; Genomic_DNA.
DR   RefSeq; NP_763913.1; NC_004461.1.
DR   RefSeq; WP_001832113.1; NZ_WBME01000026.1.
DR   AlphaFoldDB; Q8CTQ2; -.
DR   SMR; Q8CTQ2; -.
DR   STRING; 176280.SE_0358; -.
DR   PRIDE; Q8CTQ2; -.
DR   EnsemblBacteria; AAO03955; AAO03955; SE_0358.
DR   GeneID; 50019480; -.
DR   KEGG; sep:SE_0358; -.
DR   PATRIC; fig|176280.10.peg.333; -.
DR   eggNOG; COG3253; Bacteria.
DR   HOGENOM; CLU_063226_1_0_9; -.
DR   OMA; RYTMWSV; -.
DR   UniPathway; UPA00252; -.
DR   Proteomes; UP000001411; Chromosome.
DR   GO; GO:0020037; F:heme binding; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0004601; F:peroxidase activity; IEA:InterPro.
DR   GO; GO:0006783; P:heme biosynthetic process; IEA:UniProtKB-KW.
DR   HAMAP; MF_01442; Coproheme_decarbox_1; 1.
DR   InterPro; IPR031332; CHDC.
DR   InterPro; IPR010644; ChdC/CLD.
DR   InterPro; IPR011008; Dimeric_a/b-barrel.
DR   PANTHER; PTHR36843; PTHR36843; 1.
DR   Pfam; PF06778; Chlor_dismutase; 1.
DR   SUPFAM; SSF54909; SSF54909; 1.
PE   3: Inferred from homology;
KW   Heme; Heme biosynthesis; Iron; Metal-binding; Oxidoreductase.
FT   CHAIN           1..249
FT                   /note="Coproheme decarboxylase"
FT                   /id="PRO_0000294055"
FT   ACT_SITE        145
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01442"
FT   BINDING         131
FT                   /ligand="Fe-coproporphyrin III"
FT                   /ligand_id="ChEBI:CHEBI:68438"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01442"
FT   BINDING         145..149
FT                   /ligand="Fe-coproporphyrin III"
FT                   /ligand_id="ChEBI:CHEBI:68438"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01442"
FT   BINDING         172
FT                   /ligand="Fe-coproporphyrin III"
FT                   /ligand_id="ChEBI:CHEBI:68438"
FT                   /ligand_part="Fe"
FT                   /ligand_part_id="ChEBI:CHEBI:18248"
FT                   /note="axial binding residue"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01442"
FT   BINDING         185
FT                   /ligand="Fe-coproporphyrin III"
FT                   /ligand_id="ChEBI:CHEBI:68438"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01442"
SQ   SEQUENCE   249 AA;  29585 MW;  5CB50D67268E89FD CRC64;
     MSEAAETLDG WYSLHLFYAV DWTTFRLIAE DDREAMITEL ETFIKDKTVA RESHQGDHAI
     YNITGQKADL LLWFLRPEMK ELNQIENEFN KLRIADYLIP TYSYVSVIEL SNYLAGKSDE
     DPYENPHVKA RLYPELPHSE YICFYPMDKR RNETYNWYML PIEDRKTLMY NHGMIGRKYA
     GKIKQFITGS VGFDDYEWGV TLFSNDVLQF KKIVYEMRFD ETTARYGEFG SFYIGHILNI
     EDFKQFFSI
 
 
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