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CHEB_ECOLI
ID   CHEB_ECOLI              Reviewed;         349 AA.
AC   P07330; P78070;
DT   01-APR-1988, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1997, sequence version 3.
DT   03-AUG-2022, entry version 174.
DE   RecName: Full=Protein-glutamate methylesterase/protein-glutamine glutaminase {ECO:0000255|HAMAP-Rule:MF_00099, ECO:0000305};
DE            EC=3.1.1.61 {ECO:0000255|HAMAP-Rule:MF_00099, ECO:0000269|PubMed:2188960, ECO:0000269|PubMed:358191, ECO:0000269|PubMed:392505};
DE            EC=3.5.1.44 {ECO:0000255|HAMAP-Rule:MF_00099, ECO:0000269|PubMed:6300110, ECO:0000269|PubMed:6304723};
DE   AltName: Full=Chemotaxis response regulator protein-glutamate methylesterase/glutamine deamidase {ECO:0000305};
DE   AltName: Full=Methyl-accepting chemotaxis proteins-specific methylesterase/deamidase {ECO:0000305};
DE            Short=MCP-specific methylesterase/deamidase {ECO:0000305};
GN   Name=cheB {ECO:0000255|HAMAP-Rule:MF_00099, ECO:0000303|PubMed:324984};
GN   OrderedLocusNames=b1883, JW1872;
OS   Escherichia coli (strain K12).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=83333;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=3510184; DOI=10.1128/jb.165.1.161-166.1986;
RA   Mutoh N., Simon M.I.;
RT   "Nucleotide sequence corresponding to five chemotaxis genes in Escherichia
RT   coli.";
RL   J. Bacteriol. 165:161-166(1986).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX   PubMed=9097040; DOI=10.1093/dnares/3.6.379;
RA   Itoh T., Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K.,
RA   Kasai H., Kimura S., Kitakawa M., Kitagawa M., Makino K., Miki T.,
RA   Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S., Nakamura Y.,
RA   Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G., Seki Y.,
RA   Sivasundaram S., Tagami H., Takeda J., Takemoto K., Wada C., Yamamoto Y.,
RA   Horiuchi T.;
RT   "A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT   the 40.1-50.0 min region on the linkage map.";
RL   DNA Res. 3:379-392(1996).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA   Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA   Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA   Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA   Shao Y.;
RT   "The complete genome sequence of Escherichia coli K-12.";
RL   Science 277:1453-1462(1997).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX   PubMed=16738553; DOI=10.1038/msb4100049;
RA   Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA   Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT   "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT   and W3110.";
RL   Mol. Syst. Biol. 2:E1-E5(2006).
RN   [5]
RP   IDENTIFICATION, GENE NAME, AND FUNCTION.
RX   PubMed=324984; DOI=10.1128/jb.130.3.1317-1325.1977;
RA   Silverman M., Simon M.;
RT   "Identification of polypeptides necessary for chemotaxis in Escherichia
RT   coli.";
RL   J. Bacteriol. 130:1317-1325(1977).
RN   [6]
RP   DISRUPTION PHENOTYPE.
RC   STRAIN=K12;
RX   PubMed=353036; DOI=10.1128/jb.135.1.45-53.1978;
RA   Parkinson J.S.;
RT   "Complementation analysis and deletion mapping of Escherichia coli mutants
RT   defective in chemotaxis.";
RL   J. Bacteriol. 135:45-53(1978).
RN   [7]
RP   FUNCTION, CATALYTIC ACTIVITY, AND SUBCELLULAR LOCATION.
RX   PubMed=358191; DOI=10.1073/pnas.75.8.3659;
RA   Stock J.B., Koshland D.E. Jr.;
RT   "A protein methylesterase involved in bacterial sensing.";
RL   Proc. Natl. Acad. Sci. U.S.A. 75:3659-3663(1978).
RN   [8]
RP   FUNCTION, CATALYTIC ACTIVITY, AND ACTIVITY REGULATION.
RX   PubMed=392505; DOI=10.1073/pnas.76.11.5544;
RA   Toews M.L., Goy M.F., Springer M.S., Adler J.;
RT   "Attractants and repellents control demethylation of methylated chemotaxis
RT   proteins in Escherichia coli.";
RL   Proc. Natl. Acad. Sci. U.S.A. 76:5544-5548(1979).
RN   [9]
RP   FUNCTION AS A DEAMIDASE.
RX   PubMed=6300110; DOI=10.1016/s0021-9258(18)32536-5;
RA   Kehry M.R., Engstrom P., Dahlquist F.W., Hazelbauer G.L.;
RT   "Multiple covalent modifications of Trg, a sensory transducer of
RT   Escherichia coli.";
RL   J. Biol. Chem. 258:5050-5055(1983).
RN   [10]
RP   FUNCTION AS A DEAMIDASE.
RX   PubMed=6304723; DOI=10.1073/pnas.80.12.3599;
RA   Kehry M.R., Bond M.W., Hunkapiller M.W., Dahlquist F.W.;
RT   "Enzymatic deamidation of methyl-accepting chemotaxis proteins in
RT   Escherichia coli catalyzed by the cheB gene product.";
RL   Proc. Natl. Acad. Sci. U.S.A. 80:3599-3603(1983).
RN   [11]
RP   PHOSPHORYLATION.
RX   PubMed=3280143; DOI=10.1016/0092-8674(88)90489-8;
RA   Hess J.F., Oosawa K., Kaplan N., Simon M.I.;
RT   "Phosphorylation of three proteins in the signaling pathway of bacterial
RT   chemotaxis.";
RL   Cell 53:79-87(1988).
RN   [12]
RP   FUNCTION, CATALYTIC ACTIVITY, ACTIVITY REGULATION, DOMAIN, PHOSPHORYLATION,
RP   AND MUTAGENESIS OF ASP-10; ASP-11; ASP-56 AND LEU-99.
RX   PubMed=2188960; DOI=10.1128/jb.172.6.3388-3399.1990;
RA   Stewart R.C., Roth A.F., Dahlquist F.W.;
RT   "Mutations that affect control of the methylesterase activity of CheB, a
RT   component of the chemotaxis adaptation system in Escherichia coli.";
RL   J. Bacteriol. 172:3388-3399(1990).
RN   [13]
RP   INTERACTION WITH CHEA.
RX   PubMed=7578071; DOI=10.1021/bi00045a003;
RA   Li J., Swanson R.V., Simon M.I., Weis R.M.;
RT   "The response regulators CheB and CheY exhibit competitive binding to the
RT   kinase CheA.";
RL   Biochemistry 34:14626-14636(1995).
RN   [14]
RP   INTERACTION WITH CHEMORECEPTORS.
RX   PubMed=16573695; DOI=10.1111/j.1365-2958.2006.05108.x;
RA   Li M., Hazelbauer G.L.;
RT   "The carboxyl-terminal linker is important for chemoreceptor function.";
RL   Mol. Microbiol. 60:469-479(2006).
CC   -!- FUNCTION: Involved in chemotaxis (PubMed:324984, PubMed:358191,
CC       PubMed:392505, PubMed:2188960). Part of a chemotaxis signal
CC       transduction system that modulates chemotaxis in response to various
CC       stimuli (PubMed:392505, PubMed:2188960). Catalyzes the demethylation of
CC       specific methylglutamate residues introduced into the chemoreceptors
CC       (methyl-accepting chemotaxis proteins or MCP) by CheR (PubMed:358191,
CC       PubMed:392505, PubMed:2188960). Also mediates the irreversible
CC       deamidation of specific glutamine residues to glutamic acid
CC       (PubMed:6300110, PubMed:6304723). Catalyzes its own deactivation by
CC       removing the activating phosphoryl group (PubMed:2188960).
CC       {ECO:0000269|PubMed:2188960, ECO:0000269|PubMed:324984,
CC       ECO:0000269|PubMed:358191, ECO:0000269|PubMed:392505,
CC       ECO:0000269|PubMed:6300110, ECO:0000269|PubMed:6304723}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=[protein]-L-glutamate 5-O-methyl ester + H2O = H(+) + L-
CC         glutamyl-[protein] + methanol; Xref=Rhea:RHEA:23236, Rhea:RHEA-
CC         COMP:10208, Rhea:RHEA-COMP:10311, ChEBI:CHEBI:15377,
CC         ChEBI:CHEBI:15378, ChEBI:CHEBI:17790, ChEBI:CHEBI:29973,
CC         ChEBI:CHEBI:82795; EC=3.1.1.61; Evidence={ECO:0000255|HAMAP-
CC         Rule:MF_00099, ECO:0000269|PubMed:2188960, ECO:0000269|PubMed:358191,
CC         ECO:0000269|PubMed:392505};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=H2O + L-glutaminyl-[protein] = L-glutamyl-[protein] + NH4(+);
CC         Xref=Rhea:RHEA:16441, Rhea:RHEA-COMP:10207, Rhea:RHEA-COMP:10208,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:28938, ChEBI:CHEBI:29973,
CC         ChEBI:CHEBI:30011; EC=3.5.1.44; Evidence={ECO:0000255|HAMAP-
CC         Rule:MF_00099, ECO:0000269|PubMed:6300110,
CC         ECO:0000269|PubMed:6304723};
CC   -!- ACTIVITY REGULATION: Methylesterase activity is activated via
CC       phosphorylation in response to negative chemotactic stimuli and is
CC       inhibited in the presence of attractants (PubMed:392505,
CC       PubMed:2188960). Activation requires both CheA and CheW
CC       (PubMed:2188960). {ECO:0000269|PubMed:2188960,
CC       ECO:0000269|PubMed:392505}.
CC   -!- SUBUNIT: Interacts with CheA (PubMed:7578071). Binds to a C-terminal
CC       pentapeptide sequence carried by certain receptors (PubMed:16573695).
CC       {ECO:0000269|PubMed:16573695, ECO:0000269|PubMed:7578071}.
CC   -!- INTERACTION:
CC       P07330; P07363: cheA; NbExp=3; IntAct=EBI-1125895, EBI-1026773;
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00099,
CC       ECO:0000269|PubMed:358191}.
CC   -!- DOMAIN: Contains a C-terminal catalytic domain, and an N-terminal
CC       region which modulates catalytic activity. {ECO:0000255|HAMAP-
CC       Rule:MF_00099, ECO:0000269|PubMed:2188960}.
CC   -!- PTM: Phosphorylated by CheA (PubMed:3280143, PubMed:2188960).
CC       Phosphorylation of the N-terminal regulatory domain activates the
CC       methylesterase activity (PubMed:2188960). {ECO:0000269|PubMed:2188960,
CC       ECO:0000269|PubMed:3280143}.
CC   -!- DISRUPTION PHENOTYPE: Mutants are defective in chemotaxis. They exhibit
CC       very high tumbling rates. {ECO:0000269|PubMed:353036}.
CC   -!- SIMILARITY: Belongs to the CheB family. {ECO:0000255|HAMAP-
CC       Rule:MF_00099, ECO:0000305}.
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DR   EMBL; M13463; AAA23569.1; -; Genomic_DNA.
DR   EMBL; U00096; AAC74953.1; -; Genomic_DNA.
DR   EMBL; AP009048; BAA15699.1; -; Genomic_DNA.
DR   PIR; D25195; XYECEB.
DR   RefSeq; NP_416397.1; NC_000913.3.
DR   RefSeq; WP_000036361.1; NZ_LN832404.1.
DR   AlphaFoldDB; P07330; -.
DR   SMR; P07330; -.
DR   BioGRID; 4260716; 222.
DR   DIP; DIP-9272N; -.
DR   IntAct; P07330; 10.
DR   STRING; 511145.b1883; -.
DR   PaxDb; P07330; -.
DR   PRIDE; P07330; -.
DR   EnsemblBacteria; AAC74953; AAC74953; b1883.
DR   EnsemblBacteria; BAA15699; BAA15699; BAA15699.
DR   GeneID; 946394; -.
DR   KEGG; ecj:JW1872; -.
DR   KEGG; eco:b1883; -.
DR   PATRIC; fig|1411691.4.peg.364; -.
DR   EchoBASE; EB0145; -.
DR   eggNOG; COG2201; Bacteria.
DR   HOGENOM; CLU_000445_51_0_6; -.
DR   InParanoid; P07330; -.
DR   OMA; MLEMHRA; -.
DR   PhylomeDB; P07330; -.
DR   BioCyc; EcoCyc:CHEB-MON; -.
DR   BioCyc; MetaCyc:CHEB-MON; -.
DR   BRENDA; 3.1.1.61; 2026.
DR   PRO; PR:P07330; -.
DR   Proteomes; UP000000318; Chromosome.
DR   Proteomes; UP000000625; Chromosome.
DR   GO; GO:0005829; C:cytosol; IDA:EcoCyc.
DR   GO; GO:0005886; C:plasma membrane; IDA:CAFA.
DR   GO; GO:1990827; F:deaminase binding; IDA:CAFA.
DR   GO; GO:0000156; F:phosphorelay response regulator activity; IDA:EcoCyc.
DR   GO; GO:0008984; F:protein-glutamate methylesterase activity; IDA:CAFA.
DR   GO; GO:0050568; F:protein-glutamine glutaminase activity; IDA:EcoCyc.
DR   GO; GO:0006935; P:chemotaxis; IMP:EcoCyc.
DR   GO; GO:0018277; P:protein deamination; IDA:CAFA.
DR   GO; GO:0006482; P:protein demethylation; IDA:CAFA.
DR   GO; GO:0007165; P:signal transduction; IDA:EcoCyc.
DR   CDD; cd16432; CheB_Rec; 1.
DR   Gene3D; 3.40.50.180; -; 1.
DR   HAMAP; MF_00099; CheB_chemtxs; 1.
DR   InterPro; IPR008248; CheB-like.
DR   InterPro; IPR035909; CheB_C.
DR   InterPro; IPR011006; CheY-like_superfamily.
DR   InterPro; IPR000673; Sig_transdc_resp-reg_Me-estase.
DR   InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
DR   Pfam; PF01339; CheB_methylest; 1.
DR   Pfam; PF00072; Response_reg; 1.
DR   PIRSF; PIRSF000876; RR_chemtxs_CheB; 1.
DR   SMART; SM00448; REC; 1.
DR   SUPFAM; SSF52172; SSF52172; 1.
DR   SUPFAM; SSF52738; SSF52738; 1.
DR   PROSITE; PS50122; CHEB; 1.
DR   PROSITE; PS50110; RESPONSE_REGULATORY; 1.
PE   1: Evidence at protein level;
KW   Chemotaxis; Cytoplasm; Hydrolase; Phosphoprotein; Reference proteome.
FT   CHAIN           1..349
FT                   /note="Protein-glutamate methylesterase/protein-glutamine
FT                   glutaminase"
FT                   /id="PRO_0000157992"
FT   DOMAIN          5..122
FT                   /note="Response regulatory"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00099"
FT   DOMAIN          152..344
FT                   /note="CheB-type methylesterase"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00099"
FT   ACT_SITE        164
FT                   /evidence="ECO:0000250|UniProtKB:P04042, ECO:0000255|HAMAP-
FT                   Rule:MF_00099"
FT   ACT_SITE        190
FT                   /evidence="ECO:0000250|UniProtKB:P04042, ECO:0000255|HAMAP-
FT                   Rule:MF_00099"
FT   ACT_SITE        286
FT                   /evidence="ECO:0000250|UniProtKB:P04042, ECO:0000255|HAMAP-
FT                   Rule:MF_00099"
FT   MOD_RES         56
FT                   /note="4-aspartylphosphate"
FT                   /evidence="ECO:0000250|UniProtKB:P04042, ECO:0000255|HAMAP-
FT                   Rule:MF_00099"
FT   MUTAGEN         10
FT                   /note="D->N: Eliminates activation in response to negative
FT                   stimuli, but does not affect response to positive stimuli."
FT                   /evidence="ECO:0000269|PubMed:2188960"
FT   MUTAGEN         11
FT                   /note="D->E,N: Eliminates activation in response to
FT                   negative stimuli, but does not affect response to positive
FT                   stimuli."
FT                   /evidence="ECO:0000269|PubMed:2188960"
FT   MUTAGEN         56
FT                   /note="D->E,N: Eliminates activation in response to
FT                   negative stimuli, but does not affect response to positive
FT                   stimuli."
FT                   /evidence="ECO:0000269|PubMed:2188960"
FT   MUTAGEN         99
FT                   /note="L->P: Eliminates activation in response to negative
FT                   stimuli, but does not affect response to positive stimuli."
FT                   /evidence="ECO:0000269|PubMed:2188960"
FT   CONFLICT        96
FT                   /note="A -> P (in Ref. 1; AAA23569)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        125
FT                   /note="E -> Q (in Ref. 1; AAA23569)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   349 AA;  37468 MW;  6F3D1AFB8D23D3F5 CRC64;
     MSKIRVLSVD DSALMRQIMT EIINSHSDME MVATAPDPLV ARDLIKKFNP DVLTLDVEMP
     RMDGLDFLEK LMRLRPMPVV MVSSLTGKGS EVTLRALELG AIDFVTKPQL GIREGMLAYN
     EMIAEKVRTA AKASLAAHKP LSAPTTLKAG PLLSSEKLIA IGASTGGTEA IRHVLQPLPL
     SSPALLITQH MPPGFTRSFA DRLNKLCQIG VKEAEDGERV LPGHAYIAPG DRHMELSRSG
     ANYQIKIHDG PAVNRHRPSV DVLFHSVAKQ AGRNAVGVIL TGMGNDGAAG MLAMRQAGAW
     TLAQNEASCV VFGMPREAIN MGGVCEVVDL SQVSQQMLAK ISAGQAIRI
 
 
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