CHIP_SALTY
ID CHIP_SALTY Reviewed; 468 AA.
AC Q7CQY4;
DT 13-JUN-2012, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=Chitoporin;
DE Flags: Precursor;
GN Name=chiP; OrderedLocusNames=STM0687;
OS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Salmonella.
OX NCBI_TaxID=99287;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LT2 / SGSC1412 / ATCC 700720;
RX PubMed=11677609; DOI=10.1038/35101614;
RA McClelland M., Sanderson K.E., Spieth J., Clifton S.W., Latreille P.,
RA Courtney L., Porwollik S., Ali J., Dante M., Du F., Hou S., Layman D.,
RA Leonard S., Nguyen C., Scott K., Holmes A., Grewal N., Mulvaney E.,
RA Ryan E., Sun H., Florea L., Miller W., Stoneking T., Nhan M., Waterston R.,
RA Wilson R.K.;
RT "Complete genome sequence of Salmonella enterica serovar Typhimurium LT2.";
RL Nature 413:852-856(2001).
RN [2]
RP IDENTIFICATION BY MASS SPECTROMETRY, FUNCTION, SUBCELLULAR LOCATION,
RP INDUCTION, AND GENE NAME.
RC STRAIN=LT2 / MA3409;
RX PubMed=19638370; DOI=10.1101/gad.541609;
RA Figueroa-Bossi N., Valentini M., Malleret L., Fiorini F., Bossi L.;
RT "Caught at its own game: regulatory small RNA inactivated by an inducible
RT transcript mimicking its target.";
RL Genes Dev. 23:2004-2015(2009).
CC -!- FUNCTION: Involved in the uptake of chitosugars.
CC {ECO:0000269|PubMed:19638370}.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000269|PubMed:19638370}; Multi-pass membrane protein
CC {ECO:0000269|PubMed:19638370}.
CC -!- INDUCTION: In the absence of chitobiose, expression of chiPQ is
CC silenced by the ChiX small regulatory RNA (sRNA), which sequesters the
CC ribosome binding site of the chiPQ mRNA by an antisense mechanism. In
CC the presence of chitosugars, the chbBCARFG chitobiose operon is induced
CC and acts as an RNA trap to degrade the constitutively expressed ChiX,
CC leading to the translation of chiPQ. Chitobiose and chitotriose also
CC induce chiP mRNA synthesis. {ECO:0000269|PubMed:19638370}.
CC -!- SIMILARITY: Belongs to the outer membrane porin (Opr) (TC 1.B.25)
CC family. {ECO:0000305}.
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DR EMBL; AE006468; AAL19631.1; -; Genomic_DNA.
DR RefSeq; NP_459672.1; NC_003197.2.
DR RefSeq; WP_001258803.1; NC_003197.2.
DR AlphaFoldDB; Q7CQY4; -.
DR SMR; Q7CQY4; -.
DR STRING; 99287.STM0687; -.
DR PaxDb; Q7CQY4; -.
DR EnsemblBacteria; AAL19631; AAL19631; STM0687.
DR GeneID; 1252207; -.
DR KEGG; stm:STM0687; -.
DR PATRIC; fig|99287.12.peg.718; -.
DR HOGENOM; CLU_045968_0_0_6; -.
DR OMA; TWVKAEG; -.
DR PhylomeDB; Q7CQY4; -.
DR BioCyc; SENT99287:STM0687-MON; -.
DR Proteomes; UP000001014; Chromosome.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0046930; C:pore complex; IEA:UniProtKB-KW.
DR GO; GO:0015288; F:porin activity; IBA:GO_Central.
DR GO; GO:0006811; P:ion transport; IEA:UniProtKB-KW.
DR GO; GO:0015772; P:oligosaccharide transport; IBA:GO_Central.
DR GO; GO:0015774; P:polysaccharide transport; IEA:UniProtKB-KW.
DR Gene3D; 2.40.160.10; -; 1.
DR InterPro; IPR005318; OM_porin_bac.
DR InterPro; IPR023614; Porin_dom_sf.
DR PANTHER; PTHR34596; PTHR34596; 1.
DR Pfam; PF03573; OprD; 1.
PE 1: Evidence at protein level;
KW Cell outer membrane; Ion transport; Membrane; Polysaccharide transport;
KW Porin; Reference proteome; Signal; Sugar transport; Transmembrane;
KW Transmembrane beta strand; Transport.
FT SIGNAL 1..32
FT /evidence="ECO:0000255"
FT CHAIN 33..468
FT /note="Chitoporin"
FT /id="PRO_0000417586"
SQ SEQUENCE 468 AA; 52664 MW; 4FB85F27D9A6A8BC CRC64;
MRTFSGKRST LALAIAGITA MSGWIVVPQA QASGFFDDST LTGGIYYWQR ERDRKDVTDG
DKYKTNLSHA TWNANLDFQS GYAADMFGLD IAAFTAIEMA ENGDSGHPNE IAFSKKNKGY
DEDYSGDKSG ISLYKAAAKF KYGPVWARAG YIQPTGQTLL APHWSFMPGT YQGAEAGASF
DYGDAGALSF SYMWTNEYKA PWHTEMDKFY QADKKTNVDY LHSIGAKYDF KNDLVLEAAF
GQSEGYVDQY FAKASYKFDL GGNPFTTSYQ FYGARDKVDD RSVNDIYDGT AWLQALTFGY
KVAEVVDLRL EGTWVKADGQ QGYFLQRMTP TYASSNGRLD IWWDNRSDFN ANGEKAVFFG
AMYDLKNWNL PGWAVGASYV YAWDAKPATW QSNPDAYYDK NRTIEESSYS LDAVYTLQEG
RAKGTMFKLH FTEYDNHSNI PSWGGGYGNI FQDERDVKFI VIAPFTIF