CHLG_ORYSJ
ID CHLG_ORYSJ Reviewed; 376 AA.
AC Q5W6H5; A3B2Y5; B7ENB3;
DT 01-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 07-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=Chlorophyll synthase, chloroplastic;
DE EC=2.5.1.62;
DE AltName: Full=Polyprenyl transferase;
DE Flags: Precursor;
GN Name=CHLG; OrderedLocusNames=Os05g0349700, LOC_Os05g28200;
GN ORFNames=OsJ_18166 {ECO:0000312|EMBL:EEE63355.1}, OSJNBa0077J17.3;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Involved in one of the last steps of the biosynthesis of
CC chlorophyll a.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=chlorophyllide a + H(+) + phytyl diphosphate = chlorophyll a +
CC diphosphate; Xref=Rhea:RHEA:17317, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:33019, ChEBI:CHEBI:58416, ChEBI:CHEBI:75434,
CC ChEBI:CHEBI:83348; EC=2.5.1.62;
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast membrane {ECO:0000305};
CC Multi-pass membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the UbiA prenyltransferase family. Chlorophyll
CC synthase subfamily. {ECO:0000305}.
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DR EMBL; AC136221; AAV44065.1; -; Genomic_DNA.
DR EMBL; AP008211; BAF17186.1; -; Genomic_DNA.
DR EMBL; AP014961; BAS93526.1; -; Genomic_DNA.
DR EMBL; CM000142; EEE63355.1; -; Genomic_DNA.
DR EMBL; AK099004; BAG93860.1; -; mRNA.
DR RefSeq; XP_015637650.1; XM_015782164.1.
DR AlphaFoldDB; Q5W6H5; -.
DR SMR; Q5W6H5; -.
DR STRING; 4530.OS05T0349700-02; -.
DR PaxDb; Q5W6H5; -.
DR PRIDE; Q5W6H5; -.
DR EnsemblPlants; Os05t0349700-01; Os05t0349700-01; Os05g0349700.
DR EnsemblPlants; Os05t0349700-02; Os05t0349700-02; Os05g0349700.
DR GeneID; 4338498; -.
DR Gramene; Os05t0349700-01; Os05t0349700-01; Os05g0349700.
DR Gramene; Os05t0349700-02; Os05t0349700-02; Os05g0349700.
DR KEGG; osa:4338498; -.
DR eggNOG; ENOG502QQMP; Eukaryota.
DR HOGENOM; CLU_042598_1_0_1; -.
DR InParanoid; Q5W6H5; -.
DR OMA; QDMYFLR; -.
DR OrthoDB; 1231215at2759; -.
DR PlantReactome; R-OSA-1119320; Chlorophyll cycle.
DR PlantReactome; R-OSA-1119412; Chlorophyll a biosynthesis I.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000007752; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR ExpressionAtlas; Q5W6H5; baseline and differential.
DR Genevisible; Q5W6H5; OS.
DR GO; GO:0031969; C:chloroplast membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0046408; F:chlorophyll synthetase activity; IEA:UniProtKB-EC.
DR GO; GO:0015995; P:chlorophyll biosynthetic process; IEA:UniProtKB-KW.
DR CDD; cd13958; PT_UbiA_chlorophyll; 1.
DR Gene3D; 1.10.357.140; -; 1.
DR InterPro; IPR006372; Chl_synth.
DR InterPro; IPR011799; ChlG.
DR InterPro; IPR000537; UbiA_prenyltransferase.
DR InterPro; IPR044878; UbiA_sf.
DR Pfam; PF01040; UbiA; 1.
DR TIGRFAMs; TIGR02056; ChlG; 1.
DR TIGRFAMs; TIGR01476; chlor_syn_BchG; 1.
PE 2: Evidence at transcript level;
KW Chlorophyll biosynthesis; Chloroplast; Membrane; Plastid;
KW Reference proteome; Transferase; Transit peptide; Transmembrane;
KW Transmembrane helix.
FT TRANSIT 1..47
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 48..376
FT /note="Chlorophyll synthase, chloroplastic"
FT /id="PRO_0000285117"
FT TRANSMEM 95..115
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 171..191
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 197..217
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 230..250
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 255..275
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 300..320
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 325..345
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 355..375
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 48..69
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 376 AA; 40579 MW; 00055ACB2E278C94 CRC64;
MATSHLLAAA SSTAASSATF RPPLLSLRSP PPSSLRLNRR RHFQVVRAAE TDKETKANAP
EKAPAGGSSF NQLLGIKGAK QENDIWKIRL QLTKPVTWPP LVWGVLCGAA ASGNFHWTVE
DVAKSIVCMI MSGPCLTGYT QTINDWYDRD IDAINEPYRP IPSGAISENE VITQIWALLL
AGLGLGALLD VWAGHDFPII FYLAVGGSLL SYIYSAPPLK LKQNGWIGNF ALGASYIGLP
WWAGQALFGT LTPDIVVLTS LYSIAGLGIA IVNDFKSVEG DRALGLQSLP VAFGMETAKW
ICVGAIDITQ LSVAGYLFSS GKPYYALALL GLTIPQVVFQ FQYFLKDPVK YDVKYQASAQ
PFFVLGLLVT ALATSH
