CHM1B_CHICK
ID CHM1B_CHICK Reviewed; 199 AA.
AC Q5ZKX1;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 79.
DE RecName: Full=Charged multivesicular body protein 1b;
DE AltName: Full=Chromatin-modifying protein 1b;
DE Short=CHMP1b;
GN Name=CHMP1B; ORFNames=RCJMB04_8n10;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=CB; TISSUE=Bursa of Fabricius;
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.-M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- FUNCTION: Probable peripherally associated component of the endosomal
CC sorting required for transport complex III (ESCRT-III) which is
CC involved in multivesicular bodies (MVBs) formation and sorting of
CC endosomal cargo proteins into MVBs. MVBs contain intraluminal vesicles
CC (ILVs) that are generated by invagination and scission from the
CC limiting membrane of the endosome and mostly are delivered to lysosomes
CC enabling degradation of membrane proteins, such as stimulated growth
CC factor receptors, lysosomal enzymes and lipids.
CC -!- SUBUNIT: Probable peripherally associated component of the endosomal
CC sorting required for transport complex III (ESCRT-III).
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol {ECO:0000250}. Endosome
CC {ECO:0000250}. Late endosome membrane {ECO:0000250}; Peripheral
CC membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SNF7 family. {ECO:0000305}.
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DR EMBL; AJ719963; CAG31622.1; -; mRNA.
DR RefSeq; NP_001006428.1; NM_001006428.1.
DR AlphaFoldDB; Q5ZKX1; -.
DR SMR; Q5ZKX1; -.
DR STRING; 9031.ENSGALP00000006490; -.
DR PaxDb; Q5ZKX1; -.
DR GeneID; 422143; -.
DR KEGG; gga:422143; -.
DR CTD; 57132; -.
DR VEuPathDB; HostDB:geneid_422143; -.
DR eggNOG; KOG3232; Eukaryota.
DR InParanoid; Q5ZKX1; -.
DR OrthoDB; 1441797at2759; -.
DR PhylomeDB; Q5ZKX1; -.
DR PRO; PR:Q5ZKX1; -.
DR Proteomes; UP000000539; Unplaced.
DR GO; GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.
DR GO; GO:0000815; C:ESCRT III complex; IBA:GO_Central.
DR GO; GO:0031902; C:late endosome membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005771; C:multivesicular body; IBA:GO_Central.
DR GO; GO:0032509; P:endosome transport via multivesicular body sorting pathway; IBA:GO_Central.
DR GO; GO:0045324; P:late endosome to vacuole transport; IBA:GO_Central.
DR GO; GO:0015031; P:protein transport; IBA:GO_Central.
DR InterPro; IPR005024; Snf7_fam.
DR PANTHER; PTHR10476; PTHR10476; 1.
DR Pfam; PF03357; Snf7; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Cytoplasm; Endosome; Membrane; Protein transport;
KW Reference proteome; Transport.
FT CHAIN 1..199
FT /note="Charged multivesicular body protein 1b"
FT /id="PRO_0000211457"
FT REGION 167..199
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 10..48
FT /evidence="ECO:0000255"
FT COILED 178..199
FT /evidence="ECO:0000255"
FT MOTIF 186..196
FT /note="MIT-interacting motif"
FT COMPBIAS 168..186
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 199 AA; 22233 MW; 7841DFD3854E1EBE CRC64;
MSNMEKHLFN LKFAAKELNR NSKRCDKEEK AEKAKIKKAI QKGNMEVARI HAENAIRQKN
QAINFLRMSA RVDAVAARVQ TAVTMGKVTK SMAGVVKSMD ATLKSMNLEK ISALMDKFEH
QFETLDVQTQ QMENTMSNTT TLTTPQNQVD MLLQEMADEA GLDLNMELPQ GQTGSVGTSV
ASAEQDELSQ RLARLRDQV