CHMP1_ORYSJ
ID CHMP1_ORYSJ Reviewed; 205 AA.
AC Q84VG1; A0A0P0WZP2;
DT 27-MAY-2015, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=ESCRT-related protein CHMP1 {ECO:0000305};
DE AltName: Full=Protein CHARGED MULTIVESICULAR BODY PROTEIN 1 {ECO:0000305};
DE AltName: Full=Protein CHROMATIN MODIFYING PROTEIN 1 {ECO:0000305};
GN Name=CHMP1 {ECO:0000305};
GN OrderedLocusNames=Os06g0643300 {ECO:0000312|EMBL:BAF20091.1},
GN LOC_Os06g43590 {ECO:0000305};
GN ORFNames=OsJ_22129 {ECO:0000312|EMBL:EAZ37793.1},
GN P0416A11.29 {ECO:0000312|EMBL:BAD37367.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=14750518; DOI=10.1023/b:plan.0000007001.30865.0f;
RA Cooper B., Hutchison D., Park S., Guimil S., Luginbuehl P., Ellero C.,
RA Goff S.A., Glazebrook J.;
RT "Identification of rice (Oryza sativa) proteins linked to the cyclin-
RT mediated regulation of the cell cycle.";
RL Plant Mol. Biol. 53:273-279(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Involved in ESCRT-dependent multivesicular body (MVB)
CC formation and sorting of endosomal cargo proteins into MVBs.
CC {ECO:0000250|UniProtKB:Q8LE58}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:Q9HD42}.
CC Endosome membrane {ECO:0000250|UniProtKB:Q9HD42}; Peripheral membrane
CC protein {ECO:0000250|UniProtKB:Q9HD42}.
CC -!- SIMILARITY: Belongs to the SNF7 family. {ECO:0000255}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AY224520; AAO72640.1; -; mRNA.
DR EMBL; AP003523; BAD37367.1; -; Genomic_DNA.
DR EMBL; AP008212; BAF20091.1; -; Genomic_DNA.
DR EMBL; AP014962; BAS98829.1; -; Genomic_DNA.
DR EMBL; CM000143; EAZ37793.1; -; Genomic_DNA.
DR EMBL; AK061733; BAG88077.1; -; mRNA.
DR EMBL; AK099061; BAG93901.1; -; mRNA.
DR EMBL; AK104266; BAG96557.1; -; mRNA.
DR RefSeq; XP_015643810.1; XM_015788324.1.
DR AlphaFoldDB; Q84VG1; -.
DR SMR; Q84VG1; -.
DR STRING; 4530.OS06T0643300-01; -.
DR PaxDb; Q84VG1; -.
DR PRIDE; Q84VG1; -.
DR EnsemblPlants; Os06t0643300-01; Os06t0643300-01; Os06g0643300.
DR EnsemblPlants; Os06t0643300-02; Os06t0643300-02; Os06g0643300.
DR GeneID; 4341638; -.
DR Gramene; Os06t0643300-01; Os06t0643300-01; Os06g0643300.
DR Gramene; Os06t0643300-02; Os06t0643300-02; Os06g0643300.
DR KEGG; osa:4341638; -.
DR eggNOG; KOG3232; Eukaryota.
DR HOGENOM; CLU_080826_0_1_1; -.
DR InParanoid; Q84VG1; -.
DR OMA; VMDRFET; -.
DR OrthoDB; 1441797at2759; -.
DR Proteomes; UP000000763; Chromosome 6.
DR Proteomes; UP000007752; Chromosome 6.
DR Proteomes; UP000059680; Chromosome 6.
DR Genevisible; Q84VG1; OS.
DR GO; GO:0000815; C:ESCRT III complex; IBA:GO_Central.
DR GO; GO:0005771; C:multivesicular body; IBA:GO_Central.
DR GO; GO:0032509; P:endosome transport via multivesicular body sorting pathway; IBA:GO_Central.
DR GO; GO:0045324; P:late endosome to vacuole transport; IBA:GO_Central.
DR GO; GO:0015031; P:protein transport; IBA:GO_Central.
DR InterPro; IPR005024; Snf7_fam.
DR PANTHER; PTHR10476; PTHR10476; 1.
DR Pfam; PF03357; Snf7; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Cytoplasm; Endosome; Membrane; Protein transport;
KW Reference proteome; Transport.
FT CHAIN 1..205
FT /note="ESCRT-related protein CHMP1"
FT /id="PRO_0000433028"
FT COILED 13..51
FT /evidence="ECO:0000255"
FT COILED 109..140
FT /evidence="ECO:0000255"
SQ SEQUENCE 205 AA; 22842 MW; 451C0CE0F50E4E9C CRC64;
MGNPEKLMTQ IFDLKFTSKS LQRQARKCEK EEKEQKLKVK KAIEKGNMDG ARIYAENAIR
KRTEHMNYLR LASRLDAVVA RLDTQAKMQV IGKSMANIVK SLDSALATGN LQKMSETMDN
FERQFVNMEV QAEFMEGAMA GSTSLSTPET EVNSLMQQVA DDYGLEVSVG LPQAAAHAIP
AAKEKEKAVD EDDLSRRLAE LKARG
