CITD_ECOLI
ID CITD_ECOLI Reviewed; 98 AA.
AC P69330; O54336; P77618;
DT 15-FEB-2005, integrated into UniProtKB/Swiss-Prot.
DT 15-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=Citrate lyase acyl carrier protein;
DE AltName: Full=Citrate lyase gamma chain;
GN Name=citD; Synonyms=ybdX; OrderedLocusNames=b0617, JW0609;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RA Ingmer H., Cohen S.N.;
RL Submitted (JAN-1996) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RA Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M.,
RA Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D.,
RA Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.;
RT "Sequence of minutes 4-25 of Escherichia coli.";
RL Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [6]
RP OPERON STRUCTURE, AND INDUCTION.
RC STRAIN=K12 / BW25113;
RX PubMed=19429622; DOI=10.1128/jb.00108-09;
RA Shimada T., Yamamoto K., Ishihama A.;
RT "Involvement of the leucine response transcription factor LeuO in
RT regulation of the genes for sulfa drug efflux.";
RL J. Bacteriol. 191:4562-4571(2009).
CC -!- FUNCTION: Covalent carrier of the coenzyme of citrate lyase.
CC -!- SUBUNIT: Oligomer with a subunit composition of (alpha,beta,gamma)6.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm.
CC -!- INDUCTION: Repressed by H-NS. Part of the citCDEFXG operon.
CC {ECO:0000269|PubMed:19429622}.
CC -!- SIMILARITY: Belongs to the CitD family. {ECO:0000305}.
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DR EMBL; U46667; AAC28949.1; -; Genomic_DNA.
DR EMBL; U82598; AAB40817.1; -; Genomic_DNA.
DR EMBL; U00096; AAC73718.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA35253.1; -; Genomic_DNA.
DR PIR; G64795; G64795.
DR RefSeq; NP_415150.1; NC_000913.3.
DR RefSeq; WP_000700703.1; NZ_STEB01000031.1.
DR AlphaFoldDB; P69330; -.
DR SMR; P69330; -.
DR BioGRID; 4259652; 9.
DR ComplexPortal; CPX-4781; Citrate lyase complex.
DR IntAct; P69330; 3.
DR STRING; 511145.b0617; -.
DR PaxDb; P69330; -.
DR PRIDE; P69330; -.
DR EnsemblBacteria; AAC73718; AAC73718; b0617.
DR EnsemblBacteria; BAA35253; BAA35253; BAA35253.
DR GeneID; 67416339; -.
DR GeneID; 945415; -.
DR KEGG; ecj:JW0609; -.
DR KEGG; eco:b0617; -.
DR PATRIC; fig|1411691.4.peg.1651; -.
DR EchoBASE; EB3313; -.
DR eggNOG; COG3052; Bacteria.
DR HOGENOM; CLU_158489_0_0_6; -.
DR InParanoid; P69330; -.
DR OMA; YNWKEID; -.
DR PhylomeDB; P69330; -.
DR BioCyc; EcoCyc:ACPSUB-MON; -.
DR BioCyc; MetaCyc:ACPSUB-MON; -.
DR PRO; PR:P69330; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0009346; C:ATP-independent citrate lyase complex; IPI:ComplexPortal.
DR GO; GO:0051192; F:prosthetic group binding; IDA:EcoCyc.
DR GO; GO:0006084; P:acetyl-CoA metabolic process; IDA:ComplexPortal.
DR GO; GO:0006101; P:citrate metabolic process; IDA:ComplexPortal.
DR HAMAP; MF_00805; CitD; 1.
DR InterPro; IPR006495; CitD.
DR InterPro; IPR023439; Mal_deCO2ase/Cit_lyase_ACP.
DR Pfam; PF06857; ACP; 1.
DR PIRSF; PIRSF002736; Citrt_lyas_gamma; 1.
DR TIGRFAMs; TIGR01608; citD; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Phosphoprotein; Reference proteome.
FT CHAIN 1..98
FT /note="Citrate lyase acyl carrier protein"
FT /id="PRO_0000214695"
FT MOD_RES 14
FT /note="O-(phosphoribosyl dephospho-coenzyme A)serine"
FT /evidence="ECO:0000250"
FT CONFLICT 93..98
FT /note="PWEDCQ -> HGRIANDFRFAATT (in Ref. 2)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 98 AA; 10689 MW; 5932A2109978398A CRC64;
MKINQPAVAG TLESGDVMIR IAPLDTQDID LQINSSVEKQ FGDAIRTTIL DVLARYNVRG
VQLNVDDKGA LDCILRARLE ALLARASGIP ALPWEDCQ