CITRX_ORYSJ
ID CITRX_ORYSJ Reviewed; 189 AA.
AC Q8H2V6; A0A0P0XF89;
DT 15-JUN-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 03-AUG-2022, entry version 141.
DE RecName: Full=Thioredoxin-like protein CITRX, chloroplastic {ECO:0000305};
DE EC=1.8.-.- {ECO:0000305};
DE AltName: Full=Cf-9-interacting thioredoxin {ECO:0000303|PubMed:19825616};
DE Short=OsCiTrx {ECO:0000303|PubMed:19825616};
DE AltName: Full=OsTrx25;
DE Flags: Precursor;
GN OrderedLocusNames=Os08g0378900, LOC_Os08g29110;
GN ORFNames=OsJ_27130, OSJNBb0011E04.120, P0709D11.10;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=19825616; DOI=10.1093/mp/ssn076;
RA Chibani K., Wingsle G., Jacquot J.P., Gelhaye E., Rouhier N.;
RT "Comparative genomic study of the thioredoxin family in photosynthetic
RT organisms with emphasis on Populus trichocarpa.";
RL Mol. Plant 2:308-322(2009).
CC -!- FUNCTION: Probable thiol-disulfide oxidoreductase that may play a role
CC in proper chloroplast development. {ECO:0000250|UniProtKB:Q9M7X9}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000255}.
CC -!- SIMILARITY: Belongs to the thioredoxin family. Plant CITRX-type
CC subfamily. {ECO:0000305}.
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DR EMBL; AP004675; BAD05405.1; -; Genomic_DNA.
DR EMBL; AP005443; BAC22569.1; -; Genomic_DNA.
DR EMBL; AP008214; BAF23601.1; -; Genomic_DNA.
DR EMBL; AP014964; BAT05214.1; -; Genomic_DNA.
DR EMBL; CM000145; EEE68599.1; -; Genomic_DNA.
DR EMBL; AK058590; BAG86746.1; -; mRNA.
DR EMBL; AK066851; BAG90152.1; -; mRNA.
DR RefSeq; XP_015648902.1; XM_015793416.1.
DR AlphaFoldDB; Q8H2V6; -.
DR SMR; Q8H2V6; -.
DR STRING; 4530.OS08T0378900-02; -.
DR PaxDb; Q8H2V6; -.
DR PRIDE; Q8H2V6; -.
DR EnsemblPlants; Os08t0378900-01; Os08t0378900-01; Os08g0378900.
DR EnsemblPlants; Os08t0378900-02; Os08t0378900-02; Os08g0378900.
DR GeneID; 4345435; -.
DR Gramene; Os08t0378900-01; Os08t0378900-01; Os08g0378900.
DR Gramene; Os08t0378900-02; Os08t0378900-02; Os08g0378900.
DR KEGG; osa:4345435; -.
DR eggNOG; KOG0907; Eukaryota.
DR HOGENOM; CLU_110012_0_0_1; -.
DR InParanoid; Q8H2V6; -.
DR OMA; PLQMMRD; -.
DR OrthoDB; 1482186at2759; -.
DR Proteomes; UP000000763; Chromosome 8.
DR Proteomes; UP000007752; Chromosome 8.
DR Proteomes; UP000059680; Chromosome 8.
DR Genevisible; Q8H2V6; OS.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0015036; F:disulfide oxidoreductase activity; IBA:GO_Central.
DR GO; GO:0047134; F:protein-disulfide reductase (NAD(P)) activity; IEA:EnsemblPlants.
DR GO; GO:0045454; P:cell redox homeostasis; IEA:EnsemblPlants.
DR GO; GO:0009657; P:plastid organization; IBA:GO_Central.
DR InterPro; IPR044182; CITRX.
DR InterPro; IPR036249; Thioredoxin-like_sf.
DR InterPro; IPR017937; Thioredoxin_CS.
DR InterPro; IPR013766; Thioredoxin_domain.
DR PANTHER; PTHR47834; PTHR47834; 1.
DR Pfam; PF00085; Thioredoxin; 1.
DR SUPFAM; SSF52833; SSF52833; 1.
DR PROSITE; PS00194; THIOREDOXIN_1; 1.
DR PROSITE; PS51352; THIOREDOXIN_2; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Disulfide bond; Electron transport; Oxidoreductase; Plastid;
KW Redox-active center; Reference proteome; Transit peptide; Transport.
FT TRANSIT 1..56
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 57..189
FT /note="Thioredoxin-like protein CITRX, chloroplastic"
FT /id="PRO_0000394846"
FT DOMAIN 72..189
FT /note="Thioredoxin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
FT ACT_SITE 112
FT /note="Nucleophile"
FT /evidence="ECO:0000250|UniProtKB:P10599"
FT ACT_SITE 115
FT /note="Nucleophile"
FT /evidence="ECO:0000250|UniProtKB:P10599"
FT SITE 106
FT /note="Deprotonates C-terminal active site Cys"
FT /evidence="ECO:0000250|UniProtKB:P10599"
FT SITE 113
FT /note="Contributes to redox potential value"
FT /evidence="ECO:0000250|UniProtKB:P10599"
FT SITE 114
FT /note="Contributes to redox potential value"
FT /evidence="ECO:0000250|UniProtKB:P10599"
FT DISULFID 112..115
FT /note="Redox-active"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
SQ SEQUENCE 189 AA; 20529 MW; 9E8B79804F0DFF64 CRC64;
MAMAAAASLL PASAAPTLPG RAFRPPRNST PTASLSCDGG SRCRGVGLGV ILGGCRAQGV
RRNAAAETYV PGSGKYIAPD YLVKKVTAKE LEELVRGERK VPLIVDFYAT WCGPCVLMAQ
DIEMLAVEYE NNALFVKVDT DDEYELARDM QVRGLPTLYF FSPDQSKDAL RTEGLIPIDM
IRNIIDNEL
