CL056_HUMAN
ID CL056_HUMAN Reviewed; 622 AA.
AC Q8IXR9;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 06-FEB-2013, sequence version 3.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=Uncharacterized protein C12orf56;
GN Name=C12orf56;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16541075; DOI=10.1038/nature04569;
RA Scherer S.E., Muzny D.M., Buhay C.J., Chen R., Cree A., Ding Y.,
RA Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C.,
RA Hernandez J., Hodgson A.V., Hume J., Jackson A., Khan Z.M., Kovar-Smith C.,
RA Lewis L.R., Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R.,
RA Montgomery K.T., Morgan M.B., Nazareth L.V., Scott G., Sodergren E.,
RA Song X.-Z., Steffen D., Lovering R.C., Wheeler D.A., Worley K.C., Yuan Y.,
RA Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G.,
RA Chen Z., Clerc-Blankenburg K.P., Davis C., Delgado O., Dinh H.H.,
RA Draper H., Gonzalez-Garay M.L., Havlak P., Jackson L.R., Jacob L.S.,
RA Kelly S.H., Li L., Li Z., Liu J., Liu W., Lu J., Maheshwari M.,
RA Nguyen B.-V., Okwuonu G.O., Pasternak S., Perez L.M., Plopper F.J.H.,
RA Santibanez J., Shen H., Tabor P.E., Verduzco D., Waldron L., Wang Q.,
RA Williams G.A., Zhang J., Zhou J., Allen C.C., Amin A.G., Anyalebechi V.,
RA Bailey M., Barbaria J.A., Bimage K.E., Bryant N.P., Burch P.E.,
RA Burkett C.E., Burrell K.L., Calderon E., Cardenas V., Carter K., Casias K.,
RA Cavazos I., Cavazos S.R., Ceasar H., Chacko J., Chan S.N., Chavez D.,
RA Christopoulos C., Chu J., Cockrell R., Cox C.D., Dang M., Dathorne S.R.,
RA David R., Davis C.M., Davy-Carroll L., Deshazo D.R., Donlin J.E.,
RA D'Souza L., Eaves K.A., Egan A., Emery-Cohen A.J., Escotto M., Flagg N.,
RA Forbes L.D., Gabisi A.M., Garza M., Hamilton C., Henderson N.,
RA Hernandez O., Hines S., Hogues M.E., Huang M., Idlebird D.G., Johnson R.,
RA Jolivet A., Jones S., Kagan R., King L.M., Leal B., Lebow H., Lee S.,
RA LeVan J.M., Lewis L.C., London P., Lorensuhewa L.M., Loulseged H.,
RA Lovett D.A., Lucier A., Lucier R.L., Ma J., Madu R.C., Mapua P.,
RA Martindale A.D., Martinez E., Massey E., Mawhiney S., Meador M.G.,
RA Mendez S., Mercado C., Mercado I.C., Merritt C.E., Miner Z.L., Minja E.,
RA Mitchell T., Mohabbat F., Mohabbat K., Montgomery B., Moore N., Morris S.,
RA Munidasa M., Ngo R.N., Nguyen N.B., Nickerson E., Nwaokelemeh O.O.,
RA Nwokenkwo S., Obregon M., Oguh M., Oragunye N., Oviedo R.J., Parish B.J.,
RA Parker D.N., Parrish J., Parks K.L., Paul H.A., Payton B.A., Perez A.,
RA Perrin W., Pickens A., Primus E.L., Pu L.-L., Puazo M., Quiles M.M.,
RA Quiroz J.B., Rabata D., Reeves K., Ruiz S.J., Shao H., Sisson I.,
RA Sonaike T., Sorelle R.P., Sutton A.E., Svatek A.F., Svetz L.A.,
RA Tamerisa K.S., Taylor T.R., Teague B., Thomas N., Thorn R.D., Trejos Z.Y.,
RA Trevino B.K., Ukegbu O.N., Urban J.B., Vasquez L.I., Vera V.A.,
RA Villasana D.M., Wang L., Ward-Moore S., Warren J.T., Wei X., White F.,
RA Williamson A.L., Wleczyk R., Wooden H.S., Wooden S.H., Yen J., Yoon L.,
RA Yoon V., Zorrilla S.E., Nelson D., Kucherlapati R., Weinstock G.,
RA Gibbs R.A.;
RT "The finished DNA sequence of human chromosome 12.";
RL Nature 440:346-351(2006).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 19-622 (ISOFORM 2).
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q8IXR9-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q8IXR9-2; Sequence=VSP_031745;
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DR EMBL; AC012158; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AC135279; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC039369; AAH39369.1; -; mRNA.
DR CCDS; CCDS44935.1; -. [Q8IXR9-2]
DR CCDS; CCDS61182.1; -. [Q8IXR9-1]
DR RefSeq; NP_001093146.1; NM_001099676.2. [Q8IXR9-2]
DR RefSeq; NP_001164104.1; NM_001170633.1. [Q8IXR9-1]
DR AlphaFoldDB; Q8IXR9; -.
DR BioGRID; 125452; 1.
DR STRING; 9606.ENSP00000446101; -.
DR iPTMnet; Q8IXR9; -.
DR PhosphoSitePlus; Q8IXR9; -.
DR BioMuta; C12orf56; -.
DR DMDM; 449081294; -.
DR MaxQB; Q8IXR9; -.
DR PaxDb; Q8IXR9; -.
DR PeptideAtlas; Q8IXR9; -.
DR PRIDE; Q8IXR9; -.
DR Antibodypedia; 66385; 26 antibodies from 8 providers.
DR DNASU; 115749; -.
DR Ensembl; ENST00000333722.9; ENSP00000329698.5; ENSG00000185306.13. [Q8IXR9-2]
DR Ensembl; ENST00000543942.7; ENSP00000446101.2; ENSG00000185306.13. [Q8IXR9-1]
DR GeneID; 115749; -.
DR KEGG; hsa:115749; -.
DR MANE-Select; ENST00000543942.7; ENSP00000446101.2; NM_001170633.2; NP_001164104.1.
DR UCSC; uc001ssa.5; human. [Q8IXR9-1]
DR CTD; 115749; -.
DR GeneCards; C12orf56; -.
DR HGNC; HGNC:26967; C12orf56.
DR HPA; ENSG00000185306; Tissue enhanced (choroid plexus, testis).
DR neXtProt; NX_Q8IXR9; -.
DR OpenTargets; ENSG00000185306; -.
DR PharmGKB; PA143485385; -.
DR VEuPathDB; HostDB:ENSG00000185306; -.
DR eggNOG; ENOG502QVPD; Eukaryota.
DR GeneTree; ENSGT00390000018424; -.
DR HOGENOM; CLU_032455_1_0_1; -.
DR InParanoid; Q8IXR9; -.
DR OMA; LFWRSSE; -.
DR OrthoDB; 530977at2759; -.
DR PhylomeDB; Q8IXR9; -.
DR TreeFam; TF331535; -.
DR PathwayCommons; Q8IXR9; -.
DR SignaLink; Q8IXR9; -.
DR BioGRID-ORCS; 115749; 40 hits in 1039 CRISPR screens.
DR ChiTaRS; C12orf56; human.
DR GenomeRNAi; 115749; -.
DR Pharos; Q8IXR9; Tdark.
DR PRO; PR:Q8IXR9; -.
DR Proteomes; UP000005640; Chromosome 12.
DR RNAct; Q8IXR9; protein.
DR Bgee; ENSG00000185306; Expressed in sperm and 109 other tissues.
DR ExpressionAtlas; Q8IXR9; baseline and differential.
DR Genevisible; Q8IXR9; HS.
DR InterPro; IPR027878; DUF4551.
DR PANTHER; PTHR35354; PTHR35354; 1.
DR Pfam; PF15087; DUF4551; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..622
FT /note="Uncharacterized protein C12orf56"
FT /id="PRO_0000320926"
FT REGION 157..238
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 198..231
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 164..323
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:15489334"
FT /id="VSP_031745"
SQ SEQUENCE 622 AA; 71046 MW; 35E0DC70E2A6A354 CRC64;
MASPLPSGFP ARRNSRLDVF LRRHLPPEVY DAVRAYEPCI VVSNSENHIL KYVVLSDRLV
YLTENPPKSI RRVVALRDVV AIDLIDDYPE FLSSPDREIS QHIRIIYSST VLKKECKKSN
SVRKFLFPFH HTKANNKKVK EEKNGLAFWR SKESRSLKES PLRDQQESST PSKDSTLCPR
PGLKKLSLHG QGAFRPLPSP SRRSSQSAPT TGKAVSEPSC TTNTKEPQGL PDHNSISEIP
FKCNGNGNEF YLGNSLLDSP SQSNSNLEKK ESELHLYVIS TTSSIFLHLK SSWNNYIIKA
TLLQDPFYAS EFSPAIGSQK PYRSEEKIKH FSQLKSELFL KDNSLRRILS LLMELKVAAQ
KNFILKRLFW KTSDLFYFIV NKLHEYLPES RDKNALQNQS QRVDELVACI EIIQTLVLMF
RETETESSRL NTLAAKKGAL FNLLVILISE PQIPKSCPVF DIQLVADSAL VRMSFDAELQ
KLILEYTNTA TALLYEILLV FQQGNLGLGS TKFAISWIMS FLQSCPPIIT FVASIVKQVV
RGLSASFQLL SPCQAVLLYQ QFYILKSCLR HSRTLAEYIR NNYREEFRYF IHMPALQKRL
PLCYPITQPT IQLFHEVLKL VE