CLC10_RAT
ID CLC10_RAT Reviewed; 306 AA.
AC P49301;
DT 01-FEB-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1996, sequence version 1.
DT 25-MAY-2022, entry version 131.
DE RecName: Full=C-type lectin domain family 10 member A;
DE AltName: Full=MMGL;
DE AltName: Full=Macrophage asialoglycoprotein-binding protein 1;
DE Short=M-ASGP-BP-1;
DE AltName: Full=Macrophage galactose/N-acetylgalactosamine-specific lectin;
GN Name=Clec10a; Synonyms=Mgl, Mgl1;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND PARTIAL PROTEIN SEQUENCE.
RX PubMed=2358462; DOI=10.1016/s0021-9258(19)38590-4;
RA Ii M., Kurata H., Itoh N., Yamashina I., Kawasaki T.;
RT "Molecular cloning and sequence analysis of cDNA encoding the macrophage
RT lectin specific for galactose and N-acetylgalactosamine.";
RL J. Biol. Chem. 265:11295-11298(1990).
RN [2]
RP PRELIMINARY PROTEIN SEQUENCE OF 9-28.
RX PubMed=3421964; DOI=10.1016/s0006-291x(88)80554-0;
RA Ii M., Kawasaki T., Yamashina I.;
RT "Structural similarity between the macrophage lectin specific for
RT galactose/N-acetylgalactosamine and the hepatic asialoglycoprotein binding
RT protein.";
RL Biochem. Biophys. Res. Commun. 155:720-725(1988).
CC -!- FUNCTION: Recognizes terminal galactose and N-acetylgalactosamine
CC units.
CC -!- SUBUNIT: Homooligomer.
CC -!- SUBCELLULAR LOCATION: Membrane; Single-pass type II membrane protein.
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DR EMBL; J05495; AAA41216.1; -; mRNA.
DR PIR; A42230; A42230.
DR AlphaFoldDB; P49301; -.
DR SMR; P49301; -.
DR STRING; 10116.ENSRNOP00000025308; -.
DR GlyGen; P49301; 2 sites.
DR PaxDb; P49301; -.
DR UCSC; RGD:621158; rat.
DR RGD; 621158; Clec10a.
DR eggNOG; KOG4297; Eukaryota.
DR InParanoid; P49301; -.
DR PhylomeDB; P49301; -.
DR PRO; PR:P49301; -.
DR Proteomes; UP000002494; Unplaced.
DR GO; GO:0009897; C:external side of plasma membrane; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0030246; F:carbohydrate binding; IBA:GO_Central.
DR GO; GO:0002248; P:connective tissue replacement involved in inflammatory response wound healing; ISO:RGD.
DR CDD; cd03590; CLECT_DC-SIGN_like; 1.
DR Gene3D; 3.10.100.10; -; 1.
DR InterPro; IPR001304; C-type_lectin-like.
DR InterPro; IPR016186; C-type_lectin-like/link_sf.
DR InterPro; IPR018378; C-type_lectin_CS.
DR InterPro; IPR033989; CD209-like_CTLD.
DR InterPro; IPR016187; CTDL_fold.
DR Pfam; PF00059; Lectin_C; 1.
DR SMART; SM00034; CLECT; 1.
DR SUPFAM; SSF56436; SSF56436; 1.
DR PROSITE; PS00615; C_TYPE_LECTIN_1; 1.
DR PROSITE; PS50041; C_TYPE_LECTIN_2; 1.
PE 1: Evidence at protein level;
KW Calcium; Direct protein sequencing; Disulfide bond; Glycoprotein; Lectin;
KW Membrane; Reference proteome; Signal-anchor; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..306
FT /note="C-type lectin domain family 10 member A"
FT /id="PRO_0000046658"
FT TOPO_DOM 1..37
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 38..58
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT TOPO_DOM 59..306
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT DOMAIN 174..300
FT /note="C-type lectin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040"
FT CARBOHYD 76
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 168
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 175..186
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040"
FT DISULFID 203..298
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040"
FT DISULFID 276..290
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040"
SQ SEQUENCE 306 AA; 34242 MW; D68A5DFF0B9E8F13 CRC64;
MTMAYENFQN LGSEEKNQEA GKAPPQSFLC NILSWTHLLL FSLGLSLLLL VVISVIGSQN
SQLRRDLETL RTTLDNTTSN TKAELQALAS RGDSLQTGIN SLKVEVDDHG QELQAGRGLS
QKVASLESTV EKKEQTLRTD LSEITDRVQQ LGKDLKTLTC QLASLKNNGS AVACCPLHWM
EHEGSCYWFS QSGKPWPEAD KYCQLENSNL VVVNSLAEQN FLQTHMGSVV TWIGLTDQNG
PWRWVDGTDY EKGFTHWAPK QPDNWYGHGL GGGEDCAHFT SDGRWNDDVC QRPYRWVCEM
KLAKDS