CLC87_CAEBR
ID CLC87_CAEBR Reviewed; 233 AA.
AC A8WUV1;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 15-JAN-2008, sequence version 1.
DT 03-AUG-2022, entry version 62.
DE RecName: Full=C-type lectin domain-containing protein 87;
DE AltName: Full=Chondroitin proteoglycan 5;
DE Flags: Precursor;
GN Name=clec-87 {ECO:0000250|UniProtKB:Q9XVS3}; Synonyms=cpg-5;
GN ORFNames=CBG03358;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1] {ECO:0000305, ECO:0000312|EMBL:CAP24263.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16 {ECO:0000312|EMBL:CAP24263.1};
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
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DR EMBL; HE601244; CAP24263.1; -; Genomic_DNA.
DR RefSeq; XP_002633679.1; XM_002633633.1.
DR AlphaFoldDB; A8WUV1; -.
DR SMR; A8WUV1; -.
DR STRING; 6238.CBG03358; -.
DR PRIDE; A8WUV1; -.
DR EnsemblMetazoa; CBG03358.1; CBG03358.1; WBGene00026232.
DR GeneID; 8575675; -.
DR KEGG; cbr:CBG_03358; -.
DR CTD; 8575675; -.
DR WormBase; CBG03358; CBP14724; WBGene00026232; Cbr-clec-87.
DR eggNOG; KOG4297; Eukaryota.
DR HOGENOM; CLU_093598_0_0_1; -.
DR InParanoid; A8WUV1; -.
DR OMA; CYWIETE; -.
DR OrthoDB; 1197324at2759; -.
DR Proteomes; UP000008549; Chromosome IV.
DR GO; GO:0009897; C:external side of plasma membrane; IBA:GO_Central.
DR GO; GO:0030246; F:carbohydrate binding; IBA:GO_Central.
DR Gene3D; 3.10.100.10; -; 1.
DR InterPro; IPR001304; C-type_lectin-like.
DR InterPro; IPR016186; C-type_lectin-like/link_sf.
DR InterPro; IPR016187; CTDL_fold.
DR Pfam; PF00059; Lectin_C; 1.
DR SMART; SM00034; CLECT; 1.
DR SUPFAM; SSF56436; SSF56436; 1.
DR PROSITE; PS50041; C_TYPE_LECTIN_2; 1.
PE 3: Inferred from homology;
KW Disulfide bond; Glycoprotein; Lectin; Proteoglycan; Reference proteome;
KW Signal.
FT SIGNAL 1..20
FT /evidence="ECO:0000255"
FT CHAIN 21..233
FT /note="C-type lectin domain-containing protein 87"
FT /evidence="ECO:0000255"
FT /id="PRO_0000320337"
FT DOMAIN 93..223
FT /note="C-type lectin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040"
FT CARBOHYD 26
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 32
FT /note="O-linked (Xyl...) (chondroitin sulfate) serine"
FT /evidence="ECO:0000250"
FT CARBOHYD 81
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 225
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 114..222
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040"
FT DISULFID 193..214
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040"
SQ SEQUENCE 233 AA; 26809 MW; AAAF27F95B3982F0 CRC64;
MRFFRFLVFP VIAGLSSVLA APITSNDTVD GSGEAPETLL QNSEEQPHQR LKFYNWDYKD
LGTTAFEDIS FPARQPPVAV NQSEQCPDGW LRFADSCYWI ETELMGFAKA ERKCFEKQST
LFVANSLEEW DSIRSHSKEA YFSWIGLVRF THYEKSEQLP RWQTEGAINP TKMNWLIKPY
KPIVNGWTSF ANCAASYKSP ATLESASYTF FYPCTYLLYS ICERNSTIVN VMQ