CLCA_SALPC
ID CLCA_SALPC Reviewed; 473 AA.
AC C0Q5R6;
DT 28-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-MAY-2009, sequence version 1.
DT 03-AUG-2022, entry version 60.
DE RecName: Full=H(+)/Cl(-) exchange transporter ClcA {ECO:0000255|HAMAP-Rule:MF_01128};
GN Name=clcA {ECO:0000255|HAMAP-Rule:MF_01128};
GN Synonyms=eriC {ECO:0000255|HAMAP-Rule:MF_01128};
GN OrderedLocusNames=SPC_0219;
OS Salmonella paratyphi C (strain RKS4594).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Salmonella.
OX NCBI_TaxID=476213;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RKS4594;
RX PubMed=19229335; DOI=10.1371/journal.pone.0004510;
RA Liu W.-Q., Feng Y., Wang Y., Zou Q.-H., Chen F., Guo J.-T., Peng Y.-H.,
RA Jin Y., Li Y.-G., Hu S.-N., Johnston R.N., Liu G.-R., Liu S.-L.;
RT "Salmonella paratyphi C: genetic divergence from Salmonella choleraesuis
RT and pathogenic convergence with Salmonella typhi.";
RL PLoS ONE 4:E4510-E4510(2009).
CC -!- FUNCTION: Proton-coupled chloride transporter. Functions as antiport
CC system and exchanges two chloride ions for 1 proton. Probably acts as
CC an electrical shunt for an outwardly-directed proton pump that is
CC linked to amino acid decarboxylation, as part of the extreme acid
CC resistance (XAR) response. {ECO:0000255|HAMAP-Rule:MF_01128}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2 chloride(in) + H(+)(out) = 2 chloride(out) + H(+)(in);
CC Xref=Rhea:RHEA:29567, ChEBI:CHEBI:15378, ChEBI:CHEBI:17996;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01128};
CC -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_01128}.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-
CC Rule:MF_01128}; Multi-pass membrane protein {ECO:0000255|HAMAP-
CC Rule:MF_01128}.
CC -!- SIMILARITY: Belongs to the chloride channel (TC 2.A.49) family. ClcA
CC subfamily. {ECO:0000255|HAMAP-Rule:MF_01128}.
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DR EMBL; CP000857; ACN44408.1; -; Genomic_DNA.
DR RefSeq; WP_000845431.1; NC_012125.1.
DR AlphaFoldDB; C0Q5R6; -.
DR SMR; C0Q5R6; -.
DR EnsemblBacteria; ACN44408; ACN44408; SPC_0219.
DR KEGG; sei:SPC_0219; -.
DR HOGENOM; CLU_015263_7_0_6; -.
DR OMA; PMISGSG; -.
DR Proteomes; UP000001599; Chromosome.
DR GO; GO:0005887; C:integral component of plasma membrane; IEA:InterPro.
DR GO; GO:0015297; F:antiporter activity; IEA:UniProtKB-UniRule.
DR GO; GO:0005247; F:voltage-gated chloride channel activity; IEA:InterPro.
DR HAMAP; MF_01128; CLC_ClcA; 1.
DR InterPro; IPR023861; Cl-channel_ClcA.
DR InterPro; IPR014743; Cl-channel_core.
DR InterPro; IPR001807; Cl-channel_volt-gated.
DR Pfam; PF00654; Voltage_CLC; 1.
DR PRINTS; PR00762; CLCHANNEL.
DR SUPFAM; SSF81340; SSF81340; 1.
PE 3: Inferred from homology;
KW Antiport; Cell inner membrane; Cell membrane; Chloride; Ion transport;
KW Membrane; Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..473
FT /note="H(+)/Cl(-) exchange transporter ClcA"
FT /id="PRO_1000164072"
FT TOPO_DOM 1..32
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TRANSMEM 33..69
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TOPO_DOM 70..76
FT /note="Periplasmic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TRANSMEM 77..100
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT INTRAMEM 109..116
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TOPO_DOM 117..123
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TRANSMEM 124..141
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TRANSMEM 148..166
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TOPO_DOM 167..176
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT INTRAMEM 177..189
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT INTRAMEM 193..201
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TOPO_DOM 202..214
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TRANSMEM 215..232
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TOPO_DOM 233..252
FT /note="Periplasmic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TRANSMEM 253..281
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TOPO_DOM 282..287
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TRANSMEM 288..309
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TOPO_DOM 310..329
FT /note="Periplasmic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TRANSMEM 330..349
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TRANSMEM 355..376
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TOPO_DOM 377..386
FT /note="Periplasmic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT INTRAMEM 387..401
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT INTRAMEM 402..404
FT /note="Note=Loop between two helices"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT INTRAMEM 405..416
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT INTRAMEM 417..421
FT /note="Note=Loop between two helices"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TRANSMEM 422..438
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT TOPO_DOM 439..473
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT MOTIF 106..110
FT /note="Selectivity filter part_1"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT MOTIF 146..150
FT /note="Selectivity filter part_2"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT MOTIF 355..359
FT /note="Selectivity filter part_3"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT BINDING 107
FT /ligand="chloride"
FT /ligand_id="ChEBI:CHEBI:17996"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT BINDING 356
FT /ligand="chloride"
FT /ligand_id="ChEBI:CHEBI:17996"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT BINDING 357
FT /ligand="chloride"
FT /ligand_id="ChEBI:CHEBI:17996"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT BINDING 445
FT /ligand="chloride"
FT /ligand_id="ChEBI:CHEBI:17996"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT SITE 148
FT /note="Mediates proton transfer from the outer aqueous
FT phase to the interior of the protein; involved in linking
FT H(+) and Cl(-) transport"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
FT SITE 203
FT /note="Mediates proton transfer from the protein to the
FT inner aqueous phase"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01128"
SQ SEQUENCE 473 AA; 50413 MW; 7471A21FED30DF61 CRC64;
MKTDTSTFLA QQIVRLRRRD QIRRLMQRDK TPLAILFMAA VVGTLTGLVG VAFEKAVSWV
QNMRIGALVQ VADHAFLLWP LAFILSALLA MVGYFLVRKF APEAGGSGIP EIEGALEELR
PVRWWRVLPV KFIGGMGTLG AGMVLGREGP TVQIGGNLGR MVLDVFRMRS AEARHTLLAT
GAAAGLSAAF NAPLAGILFI IEEMRPQFRY NLISIKAVFT GVIMSSIVFR IFNGEAPIIE
VGKLSDAPVN TLWLYLILGI IFGCVGPVFN SLVLRTQDMF QRFHGGEIKK WVLMGGAIGG
LCGILGLIEP EAAGGGFNLI PIAAAGNFSV GLLLFIFITR VVTTLLCFSS GAPGGIFAPM
LALGTLLGTA FGMAAAVLFP QYHLEAGTFA IAGMGALMAA SVRAPLTGIV LVLEMTDNYQ
LILPMIITCL GATLLAQFLG GKPLYSTILA RTLAKQDAEQ AAKNQNASAG ENT
