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ACK1_BOVIN
ID   ACK1_BOVIN              Reviewed;        1039 AA.
AC   Q17R13; O02742;
DT   04-DEC-2007, integrated into UniProtKB/Swiss-Prot.
DT   25-JUL-2006, sequence version 1.
DT   03-AUG-2022, entry version 120.
DE   RecName: Full=Activated CDC42 kinase 1;
DE            Short=ACK-1;
DE            EC=2.7.10.2;
DE            EC=2.7.11.1;
DE   AltName: Full=Activated CDC42 kinase 2;
DE   AltName: Full=Tyrosine kinase non-receptor protein 2;
GN   Name=TNK2 {ECO:0000250|UniProtKB:Q07912};
GN   Synonyms=ACK1 {ECO:0000250|UniProtKB:Q07912}, ACK2;
OS   Bos taurus (Bovine).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
OX   NCBI_TaxID=9913;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), CATALYTIC ACTIVITY, AND INTERACTION
RP   WITH CDC42.
RC   TISSUE=Brain;
RX   PubMed=9312079; DOI=10.1074/jbc.272.40.24819;
RA   Yang W., Cerione R.A.;
RT   "Cloning and characterization of a novel Cdc42-associated tyrosine kinase,
RT   ACK-2, from bovine brain.";
RL   J. Biol. Chem. 272:24819-24824(1997).
RN   [2] {ECO:0000312|EMBL:AAI18082.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC   STRAIN=Hereford {ECO:0000312|EMBL:AAI18082.1};
RC   TISSUE=Hypothalamus {ECO:0000312|EMBL:AAI18082.1};
RG   NIH - Mammalian Gene Collection (MGC) project;
RL   Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   FUNCTION, INTERACTION WITH SNX9 AND EGFR, IDENTIFICATION IN A COMPLEX WITH
RP   SNX9 AND CLATHRIN HEAVY CHAIN, AND MUTAGENESIS OF LYS-158.
RX   PubMed=11799118; DOI=10.1074/jbc.m110329200;
RA   Lin Q., Lo C.G., Cerione R.A., Yang W.;
RT   "The Cdc42 target ACK2 interacts with sorting nexin 9 (SH3PX1) to regulate
RT   epidermal growth factor receptor degradation.";
RL   J. Biol. Chem. 277:10134-10138(2002).
CC   -!- FUNCTION: Non-receptor tyrosine-protein and serine/threonine-protein
CC       kinase that is implicated in cell spreading and migration, cell
CC       survival, cell growth and proliferation. Transduces extracellular
CC       signals to cytosolic and nuclear effectors. Phosphorylates AKT1, AR,
CC       MCF2, WASL and WWOX. Implicated in trafficking and clathrin-mediated
CC       endocytosis through binding to epidermal growth factor receptor (EGFR)
CC       and clathrin. Binds to both poly- and mono-ubiquitin and regulates
CC       ligand-induced degradation of EGFR, thereby contributing to the
CC       accumulation of EGFR at the limiting membrane of early endosomes.
CC       Downstream effector of CDC42 which mediates CDC42-dependent cell
CC       migration via phosphorylation of BCAR1. May be involved both in adult
CC       synaptic function and plasticity and in brain development. Activates
CC       AKT1 by phosphorylating it on 'Tyr-176'. Phosphorylates AR on 'Tyr-267'
CC       and 'Tyr-363' thereby promoting its recruitment to androgen-responsive
CC       enhancers (AREs). Phosphorylates WWOX on 'Tyr-287'. Phosphorylates
CC       MCF2, thereby enhancing its activity as a guanine nucleotide exchange
CC       factor (GEF) toward Rho family proteins. Contributes to the control of
CC       AXL receptor levels. Confers metastatic properties on cancer cells and
CC       promotes tumor growth by negatively regulating tumor suppressor such as
CC       WWOX and positively regulating pro-survival factors such as AKT1 and AR
CC       (By similarity). {ECO:0000250, ECO:0000269|PubMed:11799118}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + L-tyrosyl-[protein] = ADP + H(+) + O-phospho-L-tyrosyl-
CC         [protein]; Xref=Rhea:RHEA:10596, Rhea:RHEA-COMP:10136, Rhea:RHEA-
CC         COMP:10137, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:46858,
CC         ChEBI:CHEBI:82620, ChEBI:CHEBI:456216; EC=2.7.10.2;
CC         Evidence={ECO:0000250|UniProtKB:Q07912, ECO:0000255|PROSITE-
CC         ProRule:PRU10028, ECO:0000269|PubMed:9312079};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-
CC         [protein]; Xref=Rhea:RHEA:17989, Rhea:RHEA-COMP:9863, Rhea:RHEA-
CC         COMP:11604, ChEBI:CHEBI:15378, ChEBI:CHEBI:29999, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:83421, ChEBI:CHEBI:456216; EC=2.7.11.1;
CC         Evidence={ECO:0000269|PubMed:9312079};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-
CC         threonyl-[protein]; Xref=Rhea:RHEA:46608, Rhea:RHEA-COMP:11060,
CC         Rhea:RHEA-COMP:11605, ChEBI:CHEBI:15378, ChEBI:CHEBI:30013,
CC         ChEBI:CHEBI:30616, ChEBI:CHEBI:61977, ChEBI:CHEBI:456216;
CC         EC=2.7.11.1; Evidence={ECO:0000269|PubMed:9312079};
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000250|UniProtKB:Q07912};
CC   -!- SUBUNIT: Homodimer. Interacts with CDC42. Interacts with CSPG4
CC       (activated). Interacts with MERTK (activated); stimulates
CC       autophosphorylation. May interact (phosphorylated) with HSP90AB1;
CC       maintains kinase activity. Interacts with NPHP1. Interacts with SRC
CC       (via SH2 and SH3 domain). Interacts (via kinase domain) with AKT1. Part
CC       of a collagen stimulated complex involved in cell migration composed of
CC       CDC42, CRK, TNK2 and BCAR1/p130cas. Interacts with BCAR1/p130cas via
CC       SH3 domains. Forms complexes with GRB2 and numerous receptor tyrosine
CC       kinases (RTK) including LTK, AXL or PDGFRL, in which GRB2 promotes RTK
CC       recruitment by TNK2. Interacts with NEDD4 (via WW3 domain). NEDD4L and
CC       EGF promote association with NEDD4 (By similarity). Interacts with
CC       EGFR, and this interaction is dependent on EGF stimulation and kinase
CC       activity of EGFR. Interacts with SNX9 (via SH3 domain). {ECO:0000250,
CC       ECO:0000269|PubMed:11799118, ECO:0000269|PubMed:9312079}.
CC   -!- INTERACTION:
CC       Q17R13; Q9Y5X1: SNX9; Xeno; NbExp=5; IntAct=EBI-457220, EBI-77848;
CC   -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250|UniProtKB:O54967}.
CC       Nucleus {ECO:0000250|UniProtKB:O54967}. Endosome
CC       {ECO:0000250|UniProtKB:O54967}. Cell junction, adherens junction
CC       {ECO:0000250|UniProtKB:O54967}. Cytoplasmic vesicle membrane;
CC       Peripheral membrane protein; Cytoplasmic side
CC       {ECO:0000250|UniProtKB:Q07912}. Cytoplasmic vesicle, clathrin-coated
CC       vesicle {ECO:0000250|UniProtKB:Q07912}. Membrane, clathrin-coated pit
CC       {ECO:0000250|UniProtKB:O54967}. Cytoplasm, cytosol
CC       {ECO:0000250|UniProtKB:O54967}. Note=The Tyr-284 phosphorylated form is
CC       found both in the membrane and nucleus. Co-localizes with EGFR on
CC       endosomes. Nuclear translocation is CDC42-dependent. Detected in long
CC       filamentous cytosolic structures where it co-localizes with CTPS1.
CC       {ECO:0000250|UniProtKB:O54967}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=Q17R13-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q17R13-2; Sequence=VSP_038165, VSP_038166, VSP_038167;
CC   -!- TISSUE SPECIFICITY: Expressed in brain and skeletal muscle. Weakly
CC       expressed in pancreas, heart, placenta and lung.
CC   -!- DOMAIN: The EBD (EGFR-binding domain) domain is necessary for
CC       interaction with EGFR. {ECO:0000250}.
CC   -!- DOMAIN: The SAM-like domain is necessary for NEDD4-mediated
CC       ubiquitination. Promotes membrane localization and dimerization to
CC       allow for autophosphorylation (By similarity). {ECO:0000250}.
CC   -!- DOMAIN: The UBA domain binds both poly- and mono-ubiquitin.
CC       {ECO:0000250}.
CC   -!- PTM: Autophosphorylation regulates kinase activity. Phosphorylation on
CC       Tyr-518 is required for interaction with SRC and is observed during
CC       association with clathrin-coated pits (By similarity). {ECO:0000250}.
CC   -!- PTM: Polyubiquitinated by NEDD4 and NEDD4L. Degradation can be induced
CC       by EGF and is lysosome-dependent (By similarity). {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the protein kinase superfamily. Tyr protein
CC       kinase family. {ECO:0000250|UniProtKB:Q07912, ECO:0000255|PROSITE-
CC       ProRule:PRU00159}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAC05310.1; Type=Frameshift; Evidence={ECO:0000305};
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DR   EMBL; U96722; AAC05310.1; ALT_FRAME; mRNA.
DR   EMBL; BC118081; AAI18082.1; -; mRNA.
DR   RefSeq; NP_776310.2; NM_173885.3. [Q17R13-1]
DR   AlphaFoldDB; Q17R13; -.
DR   SMR; Q17R13; -.
DR   IntAct; Q17R13; 4.
DR   STRING; 9913.ENSBTAP00000043771; -.
DR   PaxDb; Q17R13; -.
DR   PRIDE; Q17R13; -.
DR   GeneID; 280710; -.
DR   KEGG; bta:280710; -.
DR   CTD; 10188; -.
DR   eggNOG; KOG0199; Eukaryota.
DR   InParanoid; Q17R13; -.
DR   OrthoDB; 1008736at2759; -.
DR   Proteomes; UP000009136; Unplaced.
DR   GO; GO:0005912; C:adherens junction; IEA:UniProtKB-SubCell.
DR   GO; GO:0005905; C:clathrin-coated pit; IEA:UniProtKB-SubCell.
DR   GO; GO:0030136; C:clathrin-coated vesicle; IEA:UniProtKB-SubCell.
DR   GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
DR   GO; GO:0030659; C:cytoplasmic vesicle membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.
DR   GO; GO:0005768; C:endosome; ISS:UniProtKB.
DR   GO; GO:0031234; C:extrinsic component of cytoplasmic side of plasma membrane; IBA:GO_Central.
DR   GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR   GO; GO:0005886; C:plasma membrane; ISS:UniProtKB.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0004715; F:non-membrane spanning protein tyrosine kinase activity; IBA:GO_Central.
DR   GO; GO:0106310; F:protein serine kinase activity; IEA:RHEA.
DR   GO; GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
DR   GO; GO:0004712; F:protein serine/threonine/tyrosine kinase activity; IEA:InterPro.
DR   GO; GO:0004713; F:protein tyrosine kinase activity; IBA:GO_Central.
DR   GO; GO:0005102; F:signaling receptor binding; IBA:GO_Central.
DR   GO; GO:0030154; P:cell differentiation; IBA:GO_Central.
DR   GO; GO:0006897; P:endocytosis; IEA:UniProtKB-KW.
DR   GO; GO:0045087; P:innate immune response; IBA:GO_Central.
DR   GO; GO:0016310; P:phosphorylation; ISS:UniProtKB.
DR   GO; GO:0007169; P:transmembrane receptor protein tyrosine kinase signaling pathway; IBA:GO_Central.
DR   Gene3D; 4.10.680.10; -; 1.
DR   InterPro; IPR030220; Ack1.
DR   InterPro; IPR015116; Cdc42-bd-like.
DR   InterPro; IPR037085; Cdc42-bd-like_dom_sf.
DR   InterPro; IPR011009; Kinase-like_dom_sf.
DR   InterPro; IPR021619; Mig-6.
DR   InterPro; IPR000719; Prot_kinase_dom.
DR   InterPro; IPR017441; Protein_kinase_ATP_BS.
DR   InterPro; IPR001245; Ser-Thr/Tyr_kinase_cat_dom.
DR   InterPro; IPR036028; SH3-like_dom_sf.
DR   InterPro; IPR001452; SH3_domain.
DR   InterPro; IPR008266; Tyr_kinase_AS.
DR   InterPro; IPR020635; Tyr_kinase_cat_dom.
DR   PANTHER; PTHR14254:SF6; PTHR14254:SF6; 1.
DR   Pfam; PF09027; GTPase_binding; 1.
DR   Pfam; PF11555; Inhibitor_Mig-6; 1.
DR   Pfam; PF07714; PK_Tyr_Ser-Thr; 1.
DR   Pfam; PF14604; SH3_9; 1.
DR   PRINTS; PR00109; TYRKINASE.
DR   SMART; SM00326; SH3; 1.
DR   SMART; SM00219; TyrKc; 1.
DR   SUPFAM; SSF50044; SSF50044; 1.
DR   SUPFAM; SSF56112; SSF56112; 1.
DR   PROSITE; PS00107; PROTEIN_KINASE_ATP; 1.
DR   PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
DR   PROSITE; PS00109; PROTEIN_KINASE_TYR; 1.
DR   PROSITE; PS50002; SH3; 1.
PE   1: Evidence at protein level;
KW   Alternative splicing; ATP-binding; Cell junction; Cell membrane;
KW   Coated pit; Cytoplasm; Cytoplasmic vesicle; Endocytosis; Endosome; Kinase;
KW   Magnesium; Membrane; Metal-binding; Methylation; Nucleotide-binding;
KW   Nucleus; Phosphoprotein; Reference proteome;
KW   Serine/threonine-protein kinase; SH3 domain; Transferase;
KW   Tyrosine-protein kinase; Ubl conjugation.
FT   CHAIN           1..1039
FT                   /note="Activated CDC42 kinase 1"
FT                   /id="PRO_0000312829"
FT   DOMAIN          126..385
FT                   /note="Protein kinase"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   DOMAIN          388..448
FT                   /note="SH3"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00192"
FT   DOMAIN          957..997
FT                   /note="UBA"
FT                   /evidence="ECO:0000255"
FT   REGION          1..110
FT                   /note="SAM-like domain"
FT                   /evidence="ECO:0000250"
FT   REGION          90..113
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          503..532
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          622..651
FT                   /note="Required for interaction with SRC"
FT                   /evidence="ECO:0000250"
FT   REGION          631..634
FT                   /note="Required for interaction with NEDD4"
FT                   /evidence="ECO:0000250"
FT   REGION          682..701
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          719..839
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          732..875
FT                   /note="EBD domain"
FT                   /evidence="ECO:0000250"
FT   REGION          878..957
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        94..113
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        516..532
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        723..753
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        771..804
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        805..826
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        883..906
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        918..934
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   ACT_SITE        252
FT                   /note="Proton acceptor"
FT                   /evidence="ECO:0000250|UniProtKB:P00517,
FT                   ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000255|PROSITE-
FT                   ProRule:PRU10028"
FT   BINDING         132..140
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000250|UniProtKB:P00517,
FT                   ECO:0000255|PROSITE-ProRule:PRU00159"
FT   BINDING         158
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000250|UniProtKB:O54967,
FT                   ECO:0000255|PROSITE-ProRule:PRU00159"
FT   MOD_RES         284
FT                   /note="Phosphotyrosine; by SRC and autocatalysis"
FT                   /evidence="ECO:0000250|UniProtKB:Q07912"
FT   MOD_RES         518
FT                   /note="Phosphotyrosine"
FT                   /evidence="ECO:0000250|UniProtKB:Q07912"
FT   MOD_RES         723
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q07912"
FT   MOD_RES         826
FT                   /note="Phosphotyrosine"
FT                   /evidence="ECO:0000250|UniProtKB:Q07912"
FT   MOD_RES         838
FT                   /note="Omega-N-methylarginine"
FT                   /evidence="ECO:0000250|UniProtKB:O54967"
FT   MOD_RES         858
FT                   /note="Phosphotyrosine"
FT                   /evidence="ECO:0000250|UniProtKB:Q07912"
FT   MOD_RES         871
FT                   /note="Phosphotyrosine"
FT                   /evidence="ECO:0000250|UniProtKB:Q07912"
FT   MOD_RES         880
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q07912"
FT   VAR_SEQ         514
FT                   /note="K -> KREPPPRPPQPAIFTQ (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:9312079"
FT                   /id="VSP_038165"
FT   VAR_SEQ         814..856
FT                   /note="MPTTQSFASDPKYATPQVIQAPGPRAGPCILPIVRDGKKVSST -> ENYVQ
FT                   NFKNLTAHHPPWRDQDTGTGSSRGPTVLSPECGRETPF (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:9312079"
FT                   /id="VSP_038166"
FT   VAR_SEQ         857..1039
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:9312079"
FT                   /id="VSP_038167"
FT   MUTAGEN         158
FT                   /note="K->R: Abolishes enzyme activity."
FT                   /evidence="ECO:0000269|PubMed:11799118"
FT   CONFLICT        203
FT                   /note="T -> M (in Ref. 1; AAC05310)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        534
FT                   /note="R -> K (in Ref. 1; AAC05310)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   1039 AA;  114868 MW;  E7834771D76F8472 CRC64;
     MQPEEGTGWL LELLSEVQLQ QYFLRLRDDL NVTRLSHFEY VKNEDLEKIG MGRPGQRRLW
     EAVKRRKAMC KRKSWMSKVF SGKRLEAEFP PHHSQSTFRK TSPTPGGSAG EGSLQSLTCL
     IGEKDLHLFE KLGDGSFGVV RRGEWDAPSG KTVSVAVKCL KPDVLSQPEA MDDFIREVNA
     MHSLDHRNLI RLYGVVLTPP MKTVTELAPL GSLLDRLRKH QGHFLLGTLS RYAVQVAEGM
     GYLEAKRFIH RDLAARNLLL ATRDLVKIGD FGLMRALPQN DDHYVMQEHR KVPFAWCAPE
     SLKTRTFSHA SDTWMFGVTL WEMFTYGQEP WIGLNGSQIL HKIDKEGERL PRPEDCPQDI
     YNVMVQCWAH KPEDRPTFVA LRDFLLEAQP TDMRALQDFE EPDKLHIQMN DVITVIEGRA
     ENYWWRGQNT RTLCVGPFPR NVVTSVAGLS AQDISQPLQN SFIHTGHGDS DPRHCWGFPD
     KIDELYLGNP MDPPDLLSVE LSTSRPTQHL GRVKKPTYDP VSEDQDPLSS DFKRLGLRKP
     GLPRGLWLAK PSARVPGTKA GRGGGEVTLI DFGEEPVVPA PRPCAPSLAQ LAMDACSLLD
     KTPPQSPTRA LPRPLHPTPV VDWDARPLPP PPAYDDVAQD EDDFEVCSIN STLVGAGVSA
     EPSQGETNYA FVPEPARLLP PLEDNLFLPP QSGGKPPNSA QTAEIFQALQ QECMRQLQVP
     PGSLVPSPSP GGDDKPQVPP RVPIPPRPTR SRGELSPVPP GEEEMGRWPG PASPPRVPPR
     EPLSPQGSRT PSPLVPPGSS PLPPRLSSSP GKTMPTTQSF ASDPKYATPQ VIQAPGPRAG
     PCILPIVRDG KKVSSTHYYL LPERPPYLER YQRFLHEAQS PRGPDPTPIP LLLPPPSTPA
     PAAPTATVRP MPQAAPDPKA NFSSNNSNPG ARPSSLRATA RLPQRGYPGD GPEAGRPADK
     IQMLQAMVHG VTTEECQAAL QSHSWSVQRA AQYLKVEQLF GLGLRPRGEC HNVLEMFDWN
     LEQAGCHLLG SCGPAHHKR
 
 
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