CLHC1_RAT
ID CLHC1_RAT Reviewed; 585 AA.
AC Q5XIR8;
DT 18-MAR-2008, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Clathrin heavy chain linker domain-containing protein 1;
GN Name=Clhc1; Synonyms=C2orf63;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
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DR EMBL; BC083604; AAH83604.1; -; mRNA.
DR RefSeq; NP_001013899.1; NM_001013877.1.
DR RefSeq; XP_008768677.1; XM_008770455.2.
DR AlphaFoldDB; Q5XIR8; -.
DR SMR; Q5XIR8; -.
DR STRING; 10116.ENSRNOP00000006085; -.
DR PaxDb; Q5XIR8; -.
DR Ensembl; ENSRNOT00000006085; ENSRNOP00000006085; ENSRNOG00000004456.
DR GeneID; 289865; -.
DR KEGG; rno:289865; -.
DR UCSC; RGD:1307937; rat.
DR CTD; 130162; -.
DR RGD; 1307937; Clhc1.
DR eggNOG; KOG0985; Eukaryota.
DR GeneTree; ENSGT00950000183166; -.
DR HOGENOM; CLU_033164_0_0_1; -.
DR InParanoid; Q5XIR8; -.
DR OMA; KSQRTAF; -.
DR OrthoDB; 665507at2759; -.
DR PhylomeDB; Q5XIR8; -.
DR TreeFam; TF328858; -.
DR PRO; PR:Q5XIR8; -.
DR Proteomes; UP000002494; Chromosome 14.
DR Bgee; ENSRNOG00000004456; Expressed in testis and 4 other tissues.
DR Gene3D; 1.25.40.30; -; 1.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR012331; Clathrin_H-chain_linker.
DR InterPro; IPR017212; CLHC1.
DR InterPro; IPR032755; TSNAXIP1_N.
DR PANTHER; PTHR10292:SF11; PTHR10292:SF11; 1.
DR Pfam; PF15739; TSNAXIP1_N; 1.
DR PIRSF; PIRSF037469; Clathrin_H-chain-rel; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Reference proteome.
FT CHAIN 1..585
FT /note="Clathrin heavy chain linker domain-containing
FT protein 1"
FT /id="PRO_0000325873"
FT COILED 118..239
FT /evidence="ECO:0000255"
SQ SEQUENCE 585 AA; 67543 MW; EE321073EEF6932A CRC64;
MPTQEVKKHA VLPPIISRND KEFLESMQRY IITETKRVGC NEEGPPDEYY TIYRNVFDKV
IDYVNAYKSV LTSIKKEYDA FIETVKKGRR NAFYLHGKLK VLAAEPTALV YHQRRTIQLE
AKMRIIDNNS KAIQLQIDQM KQLRMEYENT EVKLCASSKQ LWKPIPGMTL QDSVNLDALN
NHKQNLEDKC RKLKQDMSTM YVSAQKKADL DEEMIVLLKR RDIAENLNKD LRFRHQRLQV
ISHTLNSWMK QNMRIPFKDV LERIQQTKAI YGHAKVVDEL FEDDPNKTKE AIVMLYYIER
FHELISLGEY EKAACFAANS PKRILQNAGT MNKFKAIGKV RGKPLPLLLF FEAIFNTSQA
FKRAINVDLT LEGIKCGLSE ERLDLVTHWV TQAKLTFSEK VGDAICAYGE QHPYHKSKCL
ALAQIVYNEC GLHKKAILCL CRQGQFHEAM EHIQQSKDIN TDDLIQLITA CPQIDLIRGL
TEERNGKPPF LSFGLTVLHL FSVDMKKIGM KLLQEVSKAE KDVIEHLVMS DLFCSIEKWQ
ELANICLQNG FKNLSNDIMS ILRSQAGVSE ISEDDTTNVM EHVFW