CLPB_BLOFL
ID CLPB_BLOFL Reviewed; 872 AA.
AC Q7VQF3;
DT 11-OCT-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=Chaperone protein ClpB;
GN Name=clpB; OrderedLocusNames=Bfl182;
OS Blochmannia floridanus.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; ant endosymbionts; Candidatus Blochmannia.
OX NCBI_TaxID=203907;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=12886019; DOI=10.1073/pnas.1533499100;
RA Gil R., Silva F.J., Zientz E., Delmotte F., Gonzalez-Candelas F.,
RA Latorre A., Rausell C., Kamerbeek J., Gadau J., Hoelldobler B.,
RA van Ham R.C.H.J., Gross R., Moya A.;
RT "The genome sequence of Blochmannia floridanus: comparative analysis of
RT reduced genomes.";
RL Proc. Natl. Acad. Sci. U.S.A. 100:9388-9393(2003).
CC -!- FUNCTION: Part of a stress-induced multi-chaperone system, it is
CC involved in the recovery of the cell from heat-induced damage, in
CC cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the
CC processing of protein aggregates. Protein binding stimulates the ATPase
CC activity; ATP hydrolysis unfolds the denatured protein aggregates,
CC which probably helps expose new hydrophobic binding sites on the
CC surface of ClpB-bound aggregates, contributing to the solubilization
CC and refolding of denatured protein aggregates by DnaK (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Homohexamer. The oligomerization is ATP-dependent (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
CC -!- DOMAIN: The Clp repeat (R) domain probably functions as a substrate-
CC discriminating domain, recruiting aggregated proteins to the ClpB
CC hexamer and/or stabilizing bound proteins. The NBD2 domain is
CC responsible for oligomerization, whereas the NBD1 domain stabilizes the
CC hexamer probably in an ATP-dependent manner. The movement of the
CC coiled-coil domain is essential for ClpB ability to rescue proteins
CC from an aggregated state, probably by pulling apart large aggregated
CC proteins, which are bound between the coiled-coils motifs of adjacent
CC ClpB subunits in the functional hexamer (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family. {ECO:0000305}.
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DR EMBL; BX248583; CAD83701.1; -; Genomic_DNA.
DR RefSeq; WP_011126468.1; NC_005061.1.
DR AlphaFoldDB; Q7VQF3; -.
DR SMR; Q7VQF3; -.
DR STRING; 203907.Bfl182; -.
DR PRIDE; Q7VQF3; -.
DR EnsemblBacteria; CAD83701; CAD83701; Bfl182.
DR KEGG; bfl:Bfl182; -.
DR eggNOG; COG0542; Bacteria.
DR HOGENOM; CLU_005070_4_1_6; -.
DR OMA; ERMKAVM; -.
DR OrthoDB; 44062at2; -.
DR Proteomes; UP000002192; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0042026; P:protein refolding; IEA:InterPro.
DR GO; GO:0009408; P:response to heat; IEA:InterPro.
DR Gene3D; 1.10.1780.10; -; 1.
DR Gene3D; 3.40.50.300; -; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR017730; Chaperonin_ClpB.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 1.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF52540; SSF52540; 2.
DR SUPFAM; SSF81923; SSF81923; 1.
DR TIGRFAMs; TIGR03346; chaperone_ClpB; 1.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding; Chaperone; Coiled coil; Cytoplasm; Nucleotide-binding;
KW Reference proteome; Repeat; Stress response.
FT CHAIN 1..872
FT /note="Chaperone protein ClpB"
FT /id="PRO_0000191102"
FT DOMAIN 3..149
FT /note="Clp R"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT REGION 6..72
FT /note="Repeat 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT REGION 86..149
FT /note="Repeat 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT REGION 162..342
FT /note="NBD1"
FT /evidence="ECO:0000250"
FT REGION 343..547
FT /note="Linker"
FT /evidence="ECO:0000250"
FT REGION 557..767
FT /note="NBD2"
FT /evidence="ECO:0000250"
FT REGION 768..872
FT /note="C-terminal"
FT /evidence="ECO:0000250"
FT COILED 393..525
FT /evidence="ECO:0000250"
FT BINDING 209..216
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 607..614
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
SQ SEQUENCE 872 AA; 99659 MW; AD0F256AEC99B847 CRC64;
MRLDRFDRSF QLALSDAQSI AIGKDNQFIE PVHVMYTFLK EKKYKSIRNL LIHAGSNVDQ
LYKSVEQVCN DLPRVESVDG DREVQCSHAL VKILNLCDKL AQKYHSNIIF SEVFIIAALQ
SQDVLSILLK KSGIVKELLE KLVQYEQSNY SIHDDSFKNR TQILEQFTVD ITSLAEQNNL
DPVIGRDEEI RRTIQVLQRR TKNNPVLIGN PGVGKTAIVE GLAQRIINKE VPEGLKNSRI
LSLDIAALLA GTKYRGEFEE RFKKVLYAVS KDNNTILFID ELHVMVGAGK TDGSMDASNM
IKPKLARGEL HCVGATTLDE YSRYIEKDAA LERRFQKIFI IEPNIENTIA ILRGLKERYE
LHHNVHITDP AIVAAATLSN RYISDRQLPD KAIDLIDEAA SSIRIQIDSK PEDLDRLDRR
IIQLKLECQA LKKESDELSK KRLEILSMEL SQKEQEYSVL ESEWKRERSS LFDIQNIKSD
LEKAKTILDQ SRRIGDLAQM SELQYGRIPE LEKKLFNAIQ SSNKKMRLLR NYVSEVEIAE
VLSKWTGIPI SRILANEKNK LLNMETILHQ LVIGQDEAVR VISNAIRRSR SGLSDPKRPI
GSFMFLGPTG VGKTELCKAL SQFLFDTDNA MVRIDMSEFM EKHSVSKLLG APPGYIGYES
GAYLTESIRR RPYSIVLLDE IEKAHLDVFN ILLQVLDDGR LTDNQGRMVD FNNTVIIMTS
NLGSDLIQKK FDISDYDTMK KTVLNVVNQY FRPEFINRID EIVVFHPLSI KHLIDIANIQ
LKYLYSRLEE RGYPRTGITN KALLFLSKIG FDPIYGARPL KRIIQQYIEN PLSQKILSDD
LLPGRSITID VQNDNIVFIQ NDVIDDKDIY IN