CLPB_STRMU
ID CLPB_STRMU Reviewed; 860 AA.
AC Q8DTC7;
DT 11-OCT-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Chaperone protein ClpB;
GN Name=clpB; OrderedLocusNames=SMU_1425;
OS Streptococcus mutans serotype c (strain ATCC 700610 / UA159).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae;
OC Streptococcus.
OX NCBI_TaxID=210007;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700610 / UA159;
RX PubMed=12397186; DOI=10.1073/pnas.172501299;
RA Ajdic D.J., McShan W.M., McLaughlin R.E., Savic G., Chang J., Carson M.B.,
RA Primeaux C., Tian R., Kenton S., Jia H.G., Lin S.P., Qian Y., Li S.,
RA Zhu H., Najar F.Z., Lai H., White J., Roe B.A., Ferretti J.J.;
RT "Genome sequence of Streptococcus mutans UA159, a cariogenic dental
RT pathogen.";
RL Proc. Natl. Acad. Sci. U.S.A. 99:14434-14439(2002).
CC -!- FUNCTION: Part of a stress-induced multi-chaperone system, it is
CC involved in the recovery of the cell from heat-induced damage, in
CC cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the
CC processing of protein aggregates. Protein binding stimulates the ATPase
CC activity; ATP hydrolysis unfolds the denatured protein aggregates,
CC which probably helps expose new hydrophobic binding sites on the
CC surface of ClpB-bound aggregates, contributing to the solubilization
CC and refolding of denatured protein aggregates by DnaK (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Homohexamer. The oligomerization is ATP-dependent (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
CC -!- DOMAIN: The Clp repeat (R) domain probably functions as a substrate-
CC discriminating domain, recruiting aggregated proteins to the ClpB
CC hexamer and/or stabilizing bound proteins. The NBD2 domain is
CC responsible for oligomerization, whereas the NBD1 domain stabilizes the
CC hexamer probably in an ATP-dependent manner. The movement of the
CC coiled-coil domain is essential for ClpB ability to rescue proteins
CC from an aggregated state, probably by pulling apart large aggregated
CC proteins, which are bound between the coiled-coils motifs of adjacent
CC ClpB subunits in the functional hexamer (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family. {ECO:0000305}.
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DR EMBL; AE014133; AAN59089.1; -; Genomic_DNA.
DR RefSeq; NP_721783.1; NC_004350.2.
DR RefSeq; WP_002263115.1; NC_004350.2.
DR AlphaFoldDB; Q8DTC7; -.
DR SMR; Q8DTC7; -.
DR STRING; 210007.SMU_1425; -.
DR PRIDE; Q8DTC7; -.
DR EnsemblBacteria; AAN59089; AAN59089; SMU_1425.
DR KEGG; smu:SMU_1425; -.
DR PATRIC; fig|210007.7.peg.1269; -.
DR eggNOG; COG0542; Bacteria.
DR HOGENOM; CLU_005070_4_2_9; -.
DR OMA; KRYITDH; -.
DR PhylomeDB; Q8DTC7; -.
DR Proteomes; UP000002512; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR Gene3D; 1.10.1780.10; -; 1.
DR Gene3D; 3.40.50.300; -; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF52540; SSF52540; 2.
DR SUPFAM; SSF81923; SSF81923; 1.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding; Chaperone; Coiled coil; Cytoplasm; Nucleotide-binding;
KW Reference proteome; Repeat; Stress response.
FT CHAIN 1..860
FT /note="Chaperone protein ClpB"
FT /id="PRO_0000191186"
FT DOMAIN 2..148
FT /note="Clp R"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT REGION 5..69
FT /note="Repeat 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT REGION 84..148
FT /note="Repeat 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT REGION 161..342
FT /note="NBD1"
FT /evidence="ECO:0000250"
FT REGION 343..543
FT /note="Linker"
FT /evidence="ECO:0000250"
FT REGION 553..765
FT /note="NBD2"
FT /evidence="ECO:0000250"
FT REGION 766..860
FT /note="C-terminal"
FT /evidence="ECO:0000250"
FT COILED 393..522
FT /evidence="ECO:0000250"
FT BINDING 208..215
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 603..610
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
SQ SEQUENCE 860 AA; 98134 MW; F280D52308D1372C CRC64;
MIDKMTQLVE DSLEEAKELA IAHRNYQLDI PHLWAVLVKP DQFAFQFYQS LEINTNQLIE
IINKEIDKIP VLSSTEKSSY ARLYSQRLKN LLDDAHQEMI DLKDQVLTVE HLILALFNQQ
RNPITVFLLE QGLNKEKLYQ KMHRIRKGKP AISSSQETIY DALEKYAVNL NQRALDEPVN
KIIGRQDEMN DIIRILSRKN KNNAVLVGHS GVGKTAIIEG FVQRLVKNQV PKNLQGKVIY
SLDIGALLAG TKYRGEFEER FKALLNDIID SNGQIILFID EIHSIVSAGR TEGSVDAASI
LKPLLARGKI RIIGSTTHAE YRESIEYDRA LERRFQRILV HEPDLDYTME ILKGLKPIYE
NFHGVRLEED GLEAAASLSK RYISDRFLPD KALDLIDEAC AAKRLASHAY PVQMTNLSQQ
LISEKIRLLR LTDSDTDDKF KLNNHLEQLE EQKSQLLANW QRERELLDQV QELRSHLTAL
EEQANLALEN NQVADYVRLE DEEIRKCHQK MTALEKERLD SQKIINVTVT REDIAAVVER
LTGIKVQGVM ENERDRLLHL EELLHQKIVG QDQAVQKVSQ AIIRSRAGIQ NPKRPIGSFL
FLGPTGVGKT ALAKRLAEVL FGSELEMVRL DMSEYMEKHA VSRLVGPPPG YVGYEEGGQL
TEAVRQRLYS IVLLDEIEKA HPDVFNTLLQ VLDEGRLTDS KGRTIDFKNT ILIMTSNIGS
TNILQSLQDS GCITSEVRYK VLDELNHSFR PEFLNRIDET VLFNALSEKD MTGVVKVMVS
DLQARLLEQD IHLTLTESVY ILLAKEGFDA AFGARPMQRT IMQKLENPLA LYLIQNQKNK
EKETFVTVSV KDKKLKFTFS