ID   CLPC_NEOYE              Reviewed;         821 AA.
AC   Q1XDF4;
DT   06-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT   02-MAY-2006, sequence version 1.
DT   03-AUG-2022, entry version 60.
DE   RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpA homolog;
GN   Name=clpC;
OS   Neopyropia yezoensis (Susabi-nori) (Pyropia yezoensis).
OG   Plastid; Chloroplast.
OC   Eukaryota; Rhodophyta; Bangiophyceae; Bangiales; Bangiaceae; Neopyropia.
OX   NCBI_TaxID=2788;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=U-51;
RA   Kunimoto M., Morishima K., Yoshikawa M., Fukuda S., Kobayashi T.,
RA   Kobayashi M., Okazaki T., Ohara I., Nakayama I.;
RT   "Whole genome sequence of Porphyra yezoensis chloroplast.";
RL   Submitted (NOV-2003) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: May interact with a ClpP-like protease involved in
CC       degradation of denatured proteins in the chloroplast.
CC   -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC   -!- SIMILARITY: Belongs to the ClpA/ClpB family. {ECO:0000305}.
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DR   EMBL; AP006715; BAE92457.1; -; Genomic_DNA.
DR   RefSeq; YP_537014.1; NC_007932.1.
DR   AlphaFoldDB; Q1XDF4; -.
DR   SMR; Q1XDF4; -.
DR   GeneID; 3978846; -.
DR   GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   Gene3D; 1.10.1780.10; -; 1.
DR   Gene3D; 3.40.50.300; -; 2.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR019489; Clp_ATPase_C.
DR   InterPro; IPR036628; Clp_N_dom_sf.
DR   InterPro; IPR004176; Clp_R_dom.
DR   InterPro; IPR001270; ClpA/B.
DR   InterPro; IPR018368; ClpA/B_CS1.
DR   InterPro; IPR028299; ClpA/B_CS2.
DR   InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR001943; UVR_dom.
DR   Pfam; PF00004; AAA; 1.
DR   Pfam; PF07724; AAA_2; 1.
DR   Pfam; PF17871; AAA_lid_9; 1.
DR   Pfam; PF02861; Clp_N; 2.
DR   Pfam; PF10431; ClpB_D2-small; 1.
DR   PRINTS; PR00300; CLPPROTEASEA.
DR   SMART; SM00382; AAA; 2.
DR   SMART; SM01086; ClpB_D2-small; 1.
DR   SUPFAM; SSF52540; SSF52540; 2.
DR   SUPFAM; SSF81923; SSF81923; 1.
DR   PROSITE; PS51903; CLP_R; 1.
DR   PROSITE; PS00870; CLPAB_1; 1.
DR   PROSITE; PS00871; CLPAB_2; 1.
DR   PROSITE; PS50151; UVR; 1.
PE   3: Inferred from homology;
KW   ATP-binding; Chaperone; Chloroplast; Nucleotide-binding; Plastid; Repeat.
FT   CHAIN           1..821
FT                   /note="ATP-dependent Clp protease ATP-binding subunit ClpA
FT                   homolog"
FT                   /id="PRO_0000277286"
FT   DOMAIN          2..144
FT                   /note="Clp R"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT   REGION          5..70
FT                   /note="Repeat 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT   REGION          80..144
FT                   /note="Repeat 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01251"
FT   BINDING         210..217
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255"
FT   BINDING         549..556
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   821 AA;  91041 MW;  87E2BE96330E065C CRC64;
     MFERFTEKAI KVIMLAQEEA RRLGHNFVGT EQILLGLVGE GTGIAAQVLK SMNVNLKDAR
     VEVEKIIGRG SGFVAVEIPF TPRAKRVLEL SLEEARQLGH NYIGTEHLLM GLVREGEGVA
     ARVLENLAVD VSSIRAEVIQ MLGENAEANV SGSNTTQARS KTPTLEEFGS NLTQMAMEGG
     LDPVVGRQKE IERVIQILGR RTKNNPVLIG EPGVGKTAIA EGLAQRIANR DVPSILEDKL
     VITLDVGLLV AGTKYRGEFE ERLKRIMDEI KSADNVILVI DEVHTLIGAG AAEGAIDAAN
     LLKPALARGE LQCIGATTLE EYRKHIEKDP ALERRFQPVV VGEPSVEETI EILFGLRDRY
     EKHHQLTMSD GALAAAAKYA NQYISDRFLP DKAIDLIDEA GSRVRLLNSQ LPPAARELDK
     ELRAVLKTKD EAIRAQKYET AEQYRAREME IKAQIAAIAQ SKKNEPDLNL EDPVVTEDDI
     AEIVAAWTGI PVTKLTKSES EKLMHMEETL HGRIIGQDEA VVAVSRAIRR ARVGLKNPNR
     PIASFIFSGP TGVGKTELTK ALASYFFGSE ASMIRLDMSE YMERHTVSKL IGSPPGYVGY
     SEGGYLTEAV RKKPYTVILF DEIEKAHPDI FNLLLQILED GRLTDAKGRT IDFKNTLLIM
     TSNIGSKVIE KGGGSLGFEL SEDQTESQYT RVRSLVNEEL KQYFRPEFLN RLDEIIVFRQ
     LTKDEVREIA ELMLNEVFAR IKQQDIQLNV TERFKQRLVE EGYNPSYGAR PLRRAVMRLL
     EDSLAEEVLS GKIKAGDSAV VDVTNEGEVT VLLGEKLELL T