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CLPX_HUMAN
ID   CLPX_HUMAN              Reviewed;         633 AA.
AC   O76031; A1L428; A8K8F1; B9EGI8; Q9H4D9;
DT   30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT   11-JUL-2001, sequence version 2.
DT   03-AUG-2022, entry version 187.
DE   RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial;
DE   Flags: Precursor;
GN   Name=CLPX;
OS   Homo sapiens (Human).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], SUBCELLULAR LOCATION, AND TISSUE
RP   SPECIFICITY.
RC   TISSUE=Skeletal muscle;
RX   PubMed=11003706; DOI=10.1007/s003350010173;
RA   Corydon T.J., Wilsbech M., Jespersgaard C., Andresen B.S., Borglum A.D.,
RA   Pedersen S., Bolund L., Gregersen N., Bross P.;
RT   "Human and mouse mitochondrial orthologs of bacterial ClpX.";
RL   Mamm. Genome 11:899-905(2000).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Testis;
RX   PubMed=14702039; DOI=10.1038/ng1285;
RA   Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
RA   Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
RA   Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
RA   Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
RA   Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H.,
RA   Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M.,
RA   Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K.,
RA   Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T.,
RA   Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M.,
RA   Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S.,
RA   Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H.,
RA   Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K.,
RA   Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N.,
RA   Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
RA   Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
RA   Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
RA   Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
RA   Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y.,
RA   Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K.,
RA   Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T.,
RA   Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T.,
RA   Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y.,
RA   Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H.,
RA   Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y.,
RA   Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H.,
RA   Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O.,
RA   Isogai T., Sugano S.;
RT   "Complete sequencing and characterization of 21,243 full-length human
RT   cDNAs.";
RL   Nat. Genet. 36:40-45(2004).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M.,
RA   Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J.,
RA   Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S.,
RA   Turner R., Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H.,
RA   Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K.,
RA   Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D.,
RA   Hunkapiller M.W., Myers E.W., Venter J.C.;
RL   Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Brain, and Testis;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [5]
RP   FUNCTION, AND SUBUNIT.
RX   PubMed=11923310; DOI=10.1074/jbc.m201642200;
RA   Kang S.G., Ortega J., Singh S.K., Wang N., Huang N.N., Steven A.C.,
RA   Maurizi M.R.;
RT   "Functional proteolytic complexes of the human mitochondrial ATP-dependent
RT   protease, hClpXP.";
RL   J. Biol. Chem. 277:21095-21102(2002).
RN   [6]
RP   SUBUNIT, AND INTERACTION WITH CLPP.
RX   PubMed=15522782; DOI=10.1016/j.jsb.2004.07.004;
RA   Kang S.G., Maurizi M.R., Thompson M., Mueser T., Ahvazi B.;
RT   "Crystallography and mutagenesis point to an essential role for the N-
RT   terminus of human mitochondrial ClpP.";
RL   J. Struct. Biol. 148:338-352(2004).
RN   [7]
RP   SUBUNIT, AND IDENTIFICATION IN A COMPLEX WITH CLPP.
RX   PubMed=16115876; DOI=10.1074/jbc.m507240200;
RA   Kang S.G., Dimitrova M.N., Ortega J., Ginsburg A., Maurizi M.R.;
RT   "Human mitochondrial ClpP is a stable heptamer that assembles into a
RT   tetradecamer in the presence of ClpX.";
RL   J. Biol. Chem. 280:35424-35432(2005).
RN   [8]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Cervix carcinoma;
RX   PubMed=16964243; DOI=10.1038/nbt1240;
RA   Beausoleil S.A., Villen J., Gerber S.A., Rush J., Gygi S.P.;
RT   "A probability-based approach for high-throughput protein phosphorylation
RT   analysis and site localization.";
RL   Nat. Biotechnol. 24:1285-1292(2006).
RN   [9]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-617, AND IDENTIFICATION BY
RP   MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Leukemic T-cell;
RX   PubMed=19690332; DOI=10.1126/scisignal.2000007;
RA   Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K.,
RA   Rodionov V., Han D.K.;
RT   "Quantitative phosphoproteomic analysis of T cell receptor signaling
RT   reveals system-wide modulation of protein-protein interactions.";
RL   Sci. Signal. 2:RA46-RA46(2009).
RN   [10]
RP   ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-437, AND IDENTIFICATION BY MASS
RP   SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=19608861; DOI=10.1126/science.1175371;
RA   Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.C.,
RA   Olsen J.V., Mann M.;
RT   "Lysine acetylation targets protein complexes and co-regulates major
RT   cellular functions.";
RL   Science 325:834-840(2009).
RN   [11]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=21269460; DOI=10.1186/1752-0509-5-17;
RA   Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T.,
RA   Bennett K.L., Superti-Furga G., Colinge J.;
RT   "Initial characterization of the human central proteome.";
RL   BMC Syst. Biol. 5:17-17(2011).
RN   [12]
RP   FUNCTION, SUBCELLULAR LOCATION, AND INTERACTION WITH TFAM.
RX   PubMed=22841477; DOI=10.1016/j.yexcr.2012.07.012;
RA   Kasashima K., Sumitani M., Endo H.;
RT   "Maintenance of mitochondrial genome distribution by mitochondrial AAA+
RT   protein ClpX.";
RL   Exp. Cell Res. 318:2335-2343(2012).
RN   [13]
RP   FUNCTION, MUTAGENESIS OF GLU-359, SUBUNIT, AND INTERACTION WITH CLPP.
RX   PubMed=22710082; DOI=10.1016/j.jsb.2012.06.001;
RA   Lowth B.R., Kirstein-Miles J., Saiyed T., Broetz-Oesterhelt H.,
RA   Morimoto R.I., Truscott K.N., Dougan D.A.;
RT   "Substrate recognition and processing by a Walker B mutant of the human
RT   mitochondrial AAA+ protein CLPX.";
RL   J. Struct. Biol. 179:193-201(2012).
RN   [14]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-617, AND IDENTIFICATION BY
RP   MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Erythroleukemia;
RX   PubMed=23186163; DOI=10.1021/pr300630k;
RA   Zhou H., Di Palma S., Preisinger C., Peng M., Polat A.N., Heck A.J.,
RA   Mohammed S.;
RT   "Toward a comprehensive characterization of a human cancer cell
RT   phosphoproteome.";
RL   J. Proteome Res. 12:260-271(2013).
RN   [15]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Liver;
RX   PubMed=24275569; DOI=10.1016/j.jprot.2013.11.014;
RA   Bian Y., Song C., Cheng K., Dong M., Wang F., Huang J., Sun D., Wang L.,
RA   Ye M., Zou H.;
RT   "An enzyme assisted RP-RPLC approach for in-depth analysis of human liver
RT   phosphoproteome.";
RL   J. Proteomics 96:253-262(2014).
RN   [16]
RP   FUNCTION.
RX   PubMed=25957689; DOI=10.1016/j.cell.2015.04.017;
RA   Kardon J.R., Yien Y.Y., Huston N.C., Branco D.S., Hildick-Smith G.J.,
RA   Rhee K.Y., Paw B.H., Baker T.A.;
RT   "Mitochondrial ClpX activates a key enzyme for heme biosynthesis and
RT   erythropoiesis.";
RL   Cell 161:858-867(2015).
RN   [17]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=25944712; DOI=10.1002/pmic.201400617;
RA   Vaca Jacome A.S., Rabilloud T., Schaeffer-Reiss C., Rompais M., Ayoub D.,
RA   Lane L., Bairoch A., Van Dorsselaer A., Carapito C.;
RT   "N-terminome analysis of the human mitochondrial proteome.";
RL   Proteomics 15:2519-2524(2015).
RN   [18]
RP   INVOLVEMENT IN EPP2, FUNCTION, VARIANT EPP2 ASP-298, AND CHARACTERIZATION
RP   OF VARIANT EPP2 ASP-298.
RX   PubMed=28874591; DOI=10.1073/pnas.1700632114;
RA   Yien Y.Y., Ducamp S., van der Vorm L.N., Kardon J.R., Manceau H.,
RA   Kannengiesser C., Bergonia H.A., Kafina M.D., Karim Z., Gouya L.,
RA   Baker T.A., Puy H., Phillips J.D., Nicolas G., Paw B.H.;
RT   "Mutation in human CLPX elevates levels of delta-aminolevulinate synthase
RT   and protoporphyrin IX to promote erythropoietic protoporphyria.";
RL   Proc. Natl. Acad. Sci. U.S.A. 114:E8045-E8052(2017).
CC   -!- FUNCTION: ATP-dependent specificity component of the Clp protease
CC       complex. Hydrolyzes ATP (PubMed:28874591). Targets specific substrates
CC       for degradation by the Clp complex (PubMed:11923310, PubMed:22710082).
CC       Can perform chaperone functions in the absence of CLPP. Enhances the
CC       DNA-binding activity of TFAM and is required for maintaining a normal
CC       mitochondrial nucleoid structure (PubMed:22841477). ATP-dependent
CC       unfoldase that stimulates the incorporation of the pyridoxal phosphate
CC       cofactor into 5-aminolevulinate synthase, thereby activating 5-
CC       aminolevulinate (ALA) synthesis, the first step in heme biosynthesis
CC       (PubMed:28874591). Important for efficient erythropoiesis through up-
CC       regulation of heme biosynthesis (PubMed:25957689, PubMed:28874591).
CC       {ECO:0000269|PubMed:11923310, ECO:0000269|PubMed:22710082,
CC       ECO:0000269|PubMed:22841477, ECO:0000269|PubMed:25957689,
CC       ECO:0000269|PubMed:28874591}.
CC   -!- SUBUNIT: Homohexamer that forms a ring structure; this hexamerization
CC       requires ATP binding. Component of the Clp complex formed by the
CC       assembly of two CLPP heptameric rings with two CLPX hexameric rings,
CC       giving rise to a symmetrical structure with two central CLPP rings
CC       flanked by a CLPX ring at either end of the complex. Interacts with
CC       TFAM. {ECO:0000269|PubMed:11923310, ECO:0000269|PubMed:15522782,
CC       ECO:0000269|PubMed:16115876, ECO:0000269|PubMed:22710082,
CC       ECO:0000269|PubMed:22841477}.
CC   -!- INTERACTION:
CC       O76031; PRO_0000005516 [Q16740]: CLPP; NbExp=2; IntAct=EBI-1052667, EBI-25815820;
CC   -!- SUBCELLULAR LOCATION: Mitochondrion. Mitochondrion matrix,
CC       mitochondrion nucleoid.
CC   -!- TISSUE SPECIFICITY: Higher expression in skeletal muscle and heart and
CC       to a lesser extent in liver, brain, placenta, lung, kidney and
CC       pancreas. {ECO:0000269|PubMed:11003706}.
CC   -!- DISEASE: Protoporphyria, erythropoietic, 2 (EPP2) [MIM:618015]: An
CC       autosomal dominant form of porphyria with onset in infancy. Porphyrias
CC       are inherited defects in the biosynthesis of heme, resulting in the
CC       accumulation and increased excretion of porphyrins or porphyrin
CC       precursors. They are classified as erythropoietic or hepatic, depending
CC       on whether the enzyme deficiency occurs in red blood cells or in the
CC       liver. Erythropoietic protoporphyria is marked by excessive
CC       protoporphyrin in erythrocytes, plasma, liver and feces, and by widely
CC       varying photosensitive skin changes ranging from a burning or pruritic
CC       sensation to erythema, edema and wheals. {ECO:0000269|PubMed:28874591}.
CC       Note=The disease may be caused by variants affecting the gene
CC       represented in this entry.
CC   -!- SIMILARITY: Belongs to the ClpX chaperone family. {ECO:0000255|PROSITE-
CC       ProRule:PRU01250}.
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DR   EMBL; AJ006267; CAA06933.2; -; mRNA.
DR   EMBL; AJ276980; CAC01291.1; -; Genomic_DNA.
DR   EMBL; AJ276981; CAC01291.1; JOINED; Genomic_DNA.
DR   EMBL; AJ276966; CAC01291.1; JOINED; Genomic_DNA.
DR   EMBL; AJ276967; CAC01291.1; JOINED; Genomic_DNA.
DR   EMBL; AJ276968; CAC01291.1; JOINED; Genomic_DNA.
DR   EMBL; AJ276969; CAC01291.1; JOINED; Genomic_DNA.
DR   EMBL; AJ276970; CAC01291.1; JOINED; Genomic_DNA.
DR   EMBL; AJ276971; CAC01291.1; JOINED; Genomic_DNA.
DR   EMBL; AJ276972; CAC01291.1; JOINED; Genomic_DNA.
DR   EMBL; AJ276973; CAC01291.1; JOINED; Genomic_DNA.
DR   EMBL; AJ276974; CAC01291.1; JOINED; Genomic_DNA.
DR   EMBL; AJ276975; CAC01291.1; JOINED; Genomic_DNA.
DR   EMBL; AJ276976; CAC01291.1; JOINED; Genomic_DNA.
DR   EMBL; AJ276977; CAC01291.1; JOINED; Genomic_DNA.
DR   EMBL; AK292316; BAF85005.1; -; mRNA.
DR   EMBL; CH471082; EAW77715.1; -; Genomic_DNA.
DR   EMBL; BC130373; AAI30374.1; -; mRNA.
DR   EMBL; BC136487; AAI36488.1; -; mRNA.
DR   CCDS; CCDS10202.1; -.
DR   RefSeq; NP_006651.2; NM_006660.4.
DR   AlphaFoldDB; O76031; -.
DR   SMR; O76031; -.
DR   BioGRID; 116056; 192.
DR   ComplexPortal; CPX-6177; Mitochondrial endopeptidase ClpXP complex.
DR   CORUM; O76031; -.
DR   DIP; DIP-50293N; -.
DR   IntAct; O76031; 77.
DR   MINT; O76031; -.
DR   STRING; 9606.ENSP00000300107; -.
DR   BindingDB; O76031; -.
DR   ChEMBL; CHEMBL3797014; -.
DR   GlyGen; O76031; 1 site, 1 O-linked glycan (1 site).
DR   iPTMnet; O76031; -.
DR   PhosphoSitePlus; O76031; -.
DR   SwissPalm; O76031; -.
DR   BioMuta; CLPX; -.
DR   EPD; O76031; -.
DR   jPOST; O76031; -.
DR   MassIVE; O76031; -.
DR   MaxQB; O76031; -.
DR   PaxDb; O76031; -.
DR   PeptideAtlas; O76031; -.
DR   PRIDE; O76031; -.
DR   ProteomicsDB; 50351; -.
DR   Antibodypedia; 51984; 99 antibodies from 25 providers.
DR   DNASU; 10845; -.
DR   Ensembl; ENST00000300107.7; ENSP00000300107.3; ENSG00000166855.9.
DR   GeneID; 10845; -.
DR   KEGG; hsa:10845; -.
DR   MANE-Select; ENST00000300107.7; ENSP00000300107.3; NM_006660.5; NP_006651.2.
DR   UCSC; uc002aom.4; human.
DR   CTD; 10845; -.
DR   DisGeNET; 10845; -.
DR   GeneCards; CLPX; -.
DR   HGNC; HGNC:2088; CLPX.
DR   HPA; ENSG00000166855; Low tissue specificity.
DR   MalaCards; CLPX; -.
DR   MIM; 615611; gene.
DR   MIM; 618015; phenotype.
DR   neXtProt; NX_O76031; -.
DR   OpenTargets; ENSG00000166855; -.
DR   PharmGKB; PA26614; -.
DR   VEuPathDB; HostDB:ENSG00000166855; -.
DR   eggNOG; KOG0745; Eukaryota.
DR   GeneTree; ENSGT00390000017625; -.
DR   HOGENOM; CLU_014218_0_1_1; -.
DR   InParanoid; O76031; -.
DR   OMA; YKIWTKG; -.
DR   OrthoDB; 1040247at2759; -.
DR   PhylomeDB; O76031; -.
DR   TreeFam; TF312884; -.
DR   PathwayCommons; O76031; -.
DR   SignaLink; O76031; -.
DR   BioGRID-ORCS; 10845; 37 hits in 1089 CRISPR screens.
DR   ChiTaRS; CLPX; human.
DR   GenomeRNAi; 10845; -.
DR   Pharos; O76031; Tbio.
DR   PRO; PR:O76031; -.
DR   Proteomes; UP000005640; Chromosome 15.
DR   RNAct; O76031; protein.
DR   Bgee; ENSG00000166855; Expressed in sperm and 197 other tissues.
DR   ExpressionAtlas; O76031; baseline and differential.
DR   Genevisible; O76031; HS.
DR   GO; GO:0005829; C:cytosol; IDA:HPA.
DR   GO; GO:0009368; C:endopeptidase Clp complex; IDA:UniProtKB.
DR   GO; GO:0009841; C:mitochondrial endopeptidase Clp complex; IDA:UniProtKB.
DR   GO; GO:0005743; C:mitochondrial inner membrane; ISS:UniProtKB.
DR   GO; GO:0005759; C:mitochondrial matrix; IDA:UniProtKB.
DR   GO; GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL.
DR   GO; GO:0005739; C:mitochondrion; IDA:UniProtKB.
DR   GO; GO:0005654; C:nucleoplasm; IDA:HPA.
DR   GO; GO:0005524; F:ATP binding; ISS:UniProtKB.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IDA:UniProtKB.
DR   GO; GO:0140662; F:ATP-dependent protein folding chaperone; IEA:InterPro.
DR   GO; GO:0016504; F:peptidase activator activity; IDA:UniProtKB.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0051082; F:unfolded protein binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0046034; P:ATP metabolic process; IDA:UniProtKB.
DR   GO; GO:0006508; P:proteolysis; IDA:ComplexPortal.
DR   GO; GO:0051603; P:proteolysis involved in protein catabolic process; IDA:UniProtKB.
DR   Gene3D; 3.40.50.300; -; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR019489; Clp_ATPase_C.
DR   InterPro; IPR004487; Clp_protease_ATP-bd_su_ClpX.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR010603; Znf_CppX_C4.
DR   Pfam; PF07724; AAA_2; 1.
DR   Pfam; PF10431; ClpB_D2-small; 1.
DR   SMART; SM00382; AAA; 1.
DR   SMART; SM01086; ClpB_D2-small; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   TIGRFAMs; TIGR00382; clpX; 1.
DR   PROSITE; PS51902; CLPX_ZB; 1.
PE   1: Evidence at protein level;
KW   Acetylation; ATP-binding; Chaperone; Disease variant; Metal-binding;
KW   Mitochondrion; Mitochondrion nucleoid; Nucleotide-binding; Phosphoprotein;
KW   Reference proteome; Transit peptide; Zinc.
FT   TRANSIT         1..56
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           57..633
FT                   /note="ATP-dependent Clp protease ATP-binding subunit clpX-
FT                   like, mitochondrial"
FT                   /id="PRO_0000005518"
FT   DOMAIN          93..146
FT                   /note="ClpX-type ZB"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01250"
FT   REGION          68..100
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          598..633
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        80..100
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        598..613
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         105
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01250"
FT   BINDING         108
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01250"
FT   BINDING         127
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01250"
FT   BINDING         130
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01250"
FT   BINDING         294..301
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000250"
FT   MOD_RES         437
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0007744|PubMed:19608861"
FT   MOD_RES         617
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:19690332,
FT                   ECO:0007744|PubMed:23186163"
FT   VARIANT         298
FT                   /note="G -> D (in EPP2; results in decreased ATP
FT                   hydrolysis; cells with the mutant protein show increased
FT                   ALA levels and accumulation of the heme biosynthesis
FT                   intermediate protoporphyrin IX)"
FT                   /evidence="ECO:0000269|PubMed:28874591"
FT                   /id="VAR_081001"
FT   VARIANT         488
FT                   /note="I -> T (in dbSNP:rs35754835)"
FT                   /id="VAR_048826"
FT   MUTAGEN         359
FT                   /note="E->A: Abolishes ATP hydrolysis."
FT                   /evidence="ECO:0000269|PubMed:22710082"
FT   CONFLICT        21
FT                   /note="L -> P (in Ref. 2; BAF85005)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   633 AA;  69224 MW;  CF46A6DC0DDBF022 CRC64;
     MPSCGACTCG AAAVRLITSS LASAQRGISG GRIHMSVLGR LGTFETQILQ RAPLRSFTET
     PAYFASKDGI SKDGSGDGNK KSASEGSSKK SGSGNSGKGG NQLRCPKCGD LCTHVETFVS
     STRFVKCEKC HHFFVVLSEA DSKKSIIKEP ESAAEAVKLA FQQKPPPPPK KIYNYLDKYV
     VGQSFAKKVL SVAVYNHYKR IYNNIPANLR QQAEVEKQTS LTPRELEIRR REDEYRFTKL
     LQIAGISPHG NALGASMQQQ VNQQIPQEKR GGEVLDSSHD DIKLEKSNIL LLGPTGSGKT
     LLAQTLAKCL DVPFAICDCT TLTQAGYVGE DIESVIAKLL QDANYNVEKA QQGIVFLDEV
     DKIGSVPGIH QLRDVGGEGV QQGLLKLLEG TIVNVPEKNS RKLRGETVQV DTTNILFVAS
     GAFNGLDRII SRRKNEKYLG FGTPSNLGKG RRAAAAADLA NRSGESNTHQ DIEEKDRLLR
     HVEARDLIEF GMIPEFVGRL PVVVPLHSLD EKTLVQILTE PRNAVIPQYQ ALFSMDKCEL
     NVTEDALKAI ARLALERKTG ARGLRSIMEK LLLEPMFEVP NSDIVCVEVD KEVVEGKKEP
     GYIRAPTKES SEEEYDSGVE EEGWPRQADA ANS
 
 
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