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CLU_NEOFI
ID   CLU_NEOFI               Reviewed;        1317 AA.
AC   A1D6Y7;
DT   24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT   23-JAN-2007, sequence version 1.
DT   03-AUG-2022, entry version 80.
DE   RecName: Full=Clustered mitochondria protein homolog {ECO:0000255|HAMAP-Rule:MF_03013};
DE   AltName: Full=Protein TIF31 homolog {ECO:0000255|HAMAP-Rule:MF_03013};
GN   Name=clu1 {ECO:0000255|HAMAP-Rule:MF_03013}; Synonyms=tif31;
GN   ORFNames=NFIA_066450;
OS   Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164
OS   / JCM 1740 / NRRL 181 / WB 181) (Aspergillus fischerianus).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC   Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC   Aspergillus subgen. Fumigati.
OX   NCBI_TaxID=331117;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181
RC   / WB 181;
RX   PubMed=18404212; DOI=10.1371/journal.pgen.1000046;
RA   Fedorova N.D., Khaldi N., Joardar V.S., Maiti R., Amedeo P., Anderson M.J.,
RA   Crabtree J., Silva J.C., Badger J.H., Albarraq A., Angiuoli S., Bussey H.,
RA   Bowyer P., Cotty P.J., Dyer P.S., Egan A., Galens K., Fraser-Liggett C.M.,
RA   Haas B.J., Inman J.M., Kent R., Lemieux S., Malavazi I., Orvis J.,
RA   Roemer T., Ronning C.M., Sundaram J.P., Sutton G., Turner G., Venter J.C.,
RA   White O.R., Whitty B.R., Youngman P., Wolfe K.H., Goldman G.H.,
RA   Wortman J.R., Jiang B., Denning D.W., Nierman W.C.;
RT   "Genomic islands in the pathogenic filamentous fungus Aspergillus
RT   fumigatus.";
RL   PLoS Genet. 4:E1000046-E1000046(2008).
CC   -!- FUNCTION: mRNA-binding protein involved in proper cytoplasmic
CC       distribution of mitochondria. {ECO:0000255|HAMAP-Rule:MF_03013}.
CC   -!- SUBUNIT: May associate with the eukaryotic translation initiation
CC       factor 3 (eIF-3) complex. {ECO:0000255|HAMAP-Rule:MF_03013}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_03013}.
CC   -!- SIMILARITY: Belongs to the CLU family. {ECO:0000255|HAMAP-
CC       Rule:MF_03013}.
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DR   EMBL; DS027690; EAW21481.1; -; Genomic_DNA.
DR   RefSeq; XP_001263378.1; XM_001263377.1.
DR   AlphaFoldDB; A1D6Y7; -.
DR   SMR; A1D6Y7; -.
DR   STRING; 36630.CADNFIAP00005514; -.
DR   EnsemblFungi; EAW21481; EAW21481; NFIA_066450.
DR   GeneID; 4590014; -.
DR   KEGG; nfi:NFIA_066450; -.
DR   VEuPathDB; FungiDB:NFIA_066450; -.
DR   eggNOG; KOG1839; Eukaryota.
DR   HOGENOM; CLU_003256_2_0_1; -.
DR   OMA; VSGFYVN; -.
DR   OrthoDB; 60958at2759; -.
DR   Proteomes; UP000006702; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0007005; P:mitochondrion organization; IEA:UniProtKB-UniRule.
DR   GO; GO:0051640; P:organelle localization; IEA:UniProt.
DR   CDD; cd15466; CLU-central; 1.
DR   Gene3D; 1.25.40.10; -; 2.
DR   Gene3D; 3.30.2280.10; -; 1.
DR   HAMAP; MF_03013; CLU; 1.
DR   InterPro; IPR033646; CLU-central.
DR   InterPro; IPR025697; CLU_dom.
DR   InterPro; IPR028275; CLU_N.
DR   InterPro; IPR027523; CLU_prot.
DR   InterPro; IPR023231; GSKIP_dom_sf.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR019734; TPR_repeat.
DR   PANTHER; PTHR12601; PTHR12601; 1.
DR   Pfam; PF13236; CLU; 1.
DR   Pfam; PF15044; CLU_N; 1.
DR   Pfam; PF12807; eIF3_p135; 1.
DR   SUPFAM; SSF103107; SSF103107; 1.
DR   SUPFAM; SSF48452; SSF48452; 2.
DR   PROSITE; PS51823; CLU; 1.
DR   PROSITE; PS50005; TPR; 1.
PE   3: Inferred from homology;
KW   Cytoplasm; Reference proteome; Repeat; TPR repeat.
FT   CHAIN           1..1317
FT                   /note="Clustered mitochondria protein homolog"
FT                   /id="PRO_0000366409"
FT   DOMAIN          382..626
FT                   /note="Clu"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01167"
FT   REPEAT          1040..1073
FT                   /note="TPR 1"
FT   REPEAT          1082..1115
FT                   /note="TPR 2"
FT   REPEAT          1124..1157
FT                   /note="TPR 3"
FT   REGION          669..700
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          939..966
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1252..1273
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1288..1317
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        946..966
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1317 AA;  146571 MW;  26B17AA68EB6821D CRC64;
     MAQTNGDMEH SKGWSGHFAD FSTAQFRRPR SVCSSDETNG SFFLLQRLPK PNQSNSPPMV
     NRLKDSRKRR AAVVCRIRDT RDGWFSALVL SSLTSSVIGL FQISVKLPHE PYKIQVMVSS
     QEQVQDVRQS IVELPGTFQY TCFHLEFNGK RINDFVELSE VEGLKADSEI VLVEDPYTEK
     EARMHMVRIR DLVGAAGDRS DNLHGLNAGL SLHDAVTAEA AADDVKEHSL SKYDITASPS
     LETILPRVEA PLPKTVKSIS LSAWNPPPYH LRQKGHLLYL QVTTNEGEQF QITSHVSGFY
     VNKCSNHKFD PLPRTTPKKV SAHSLLTLIS KLSPSFNSAF EALQESNNKK DLLTTFPFQN
     AIPNSPWLVT PPSSNPNSHQ ADITRSQESY LVSGVDNAET LRDWNEEFQT TRELPRETVQ
     DRVFRERLTS KLFADYNEAA ARGAVLVARG EVAPLNPTED RDAQIFVYNN IFYSFGADGV
     GTFVSEGGDE AARVAVGKDV LGIKAVNQLD INGLFTPGTV VVDYLGKRIV GQSIVPGIFK
     QREPGEHQID YGGVEGKDVV ATHPDFVSVF EKMSKALRIK KHPVWDKEGK RHELEGSVET
     KGLLGTDGRK YVLDLYRVTP LDVTWQEEPG SEDYPHRMSV LRLELVEAYW RSKMSQYVKA
     EVERRRAAKA QEEAANKEQS SEVTESKEQE SEEKAEEALD QERVDISGFQ LALNPDVCSG
     QVPQTEEEKK QWAEDEKEVR DACEFLRSKV IPELIQDLHD GDVGFPMDGQ SLSQLLHKRG
     INIRYLGKLA QLSKEKGSRL EALTTLLVQE MIARAFKHIA NRYLRNVPAP FVASCVAHLL
     NCLLGADVNP NPSAEIDASL REIYPEGDFS FEKVTPETLR AEVEKQVTVR YRYTLEAEWF
     ASLRHLQVLR DIAIKLGLQL GARDYAFTKA QLPAKVPVAN GVNGASHDEG KKKKKKGGDS
     KSPSRAVVEE KPVISIVPDD IVNVVPLVKD ASPRSSLAEE ALEAGRISLM QNQKQLGQEL
     ILESLSLHEQ IYGILHPEVA KLYHQLSMLY YQTDEKEAAV ELARKAVIVT ERTLGVDSAD
     TILAYLNLSL FEHASGNTKA ALVYIKHAMD LWKIIYGSNH PDSITTMNNA AVMLQHLKQY
     SDSRKWFEAS LAVCESLFGK QSINTATILF QLAQALALDQ DSKGAVGKMR DAYNIFLNQL
     GPNDRNTKEA ETWLEQLTQN AVSIAKHAKD IQARRLRRIN MNPRVTTLGT KVQPQVGQTA
     PEASGAKGAA NASMDSRSID ELLKFIEGGD ATSSRSKQKK RAAASNPKLR GSKKSSA
 
 
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