CNDG2_DANRE
ID CNDG2_DANRE Reviewed; 1140 AA.
AC E7FH61; F8W2J6;
DT 26-FEB-2020, integrated into UniProtKB/Swiss-Prot.
DT 20-JAN-2016, sequence version 2.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=Condensin-2 complex subunit G2 {ECO:0000305};
DE AltName: Full=Chromosome-associated protein G2 {ECO:0000305};
DE Short=CAP-G2 {ECO:0000305};
DE AltName: Full=Non-SMC condensin II complex subunit G2 {ECO:0000312|Ensembl:ENSDARP00000124705};
GN Name=ncapg2 {ECO:0000303|PubMed:30609410,
GN ECO:0000312|ZFIN:ZDB-GENE-070410-100};
GN ORFNames=zgc:162881 {ECO:0000312|ZFIN:ZDB-GENE-070410-100};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955 {ECO:0000312|Proteomes:UP000000437};
RN [1] {ECO:0000312|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000312|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
RN [2] {ECO:0000305}
RP FUNCTION, AND DISRUPTION PHENOTYPE.
RX PubMed=30609410; DOI=10.1016/j.ajhg.2018.11.017;
RG Task Force for Neonatal Genomics;
RA Khan T.N., Khan K., Sadeghpour A., Reynolds H., Perilla Y., McDonald M.T.,
RA Gallentine W.B., Baig S.M., Davis E.E., Katsanis N.;
RT "Mutations in NCAPG2 Cause a Severe Neurodevelopmental Syndrome that
RT Expands the Phenotypic Spectrum of Condensinopathies.";
RL Am. J. Hum. Genet. 104:94-111(2019).
CC -!- FUNCTION: Regulatory subunit of the condensin-2 complex, a complex
CC which establishes mitotic chromosome architecture and is involved in
CC physical rigidity of the chromatid axis (By similarity). Plays a role
CC in the embryonic development of the head and kidney structures
CC (PubMed:30609410). {ECO:0000250|UniProtKB:Q86XI2,
CC ECO:0000269|PubMed:30609410}.
CC -!- SUBUNIT: Component of the condensin-2 complex, which contains the smc2
CC and smc4 heterodimer, and three non SMC subunits that probably regulate
CC the complex: ncaph2, ncapd3 and ncapg2. {ECO:0000250|UniProtKB:Q86XI2}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q86XI2}.
CC -!- DISRUPTION PHENOTYPE: At 3 dpf, mutant animals exhibit cerebellar
CC hypoplasia, a reduction in the anterior structures, including the optic
CC tecta, and an increase in cell proliferation in the head
CC (PubMed:30609410). At 2 dpf, aberrant mitotic cell-cycle progression
CC and an increase in cell death (PubMed:30609410). At 4 dpf, renal
CC defects including renal aplasia, hypoplasia and enlargment of the
CC proximal renal convolution tubule are observed (PubMed:30609410).
CC Morpholino knockdown results in reduced head size, increased cell
CC proliferation in the head, increased cell death and increased renal-
CC tubule diameter (PubMed:30609410). In a double morpholino knockdown
CC together with nphp1, the increase in renal-tubule diameter is
CC exacerbated (PubMed:30609410). {ECO:0000269|PubMed:30609410}.
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DR EMBL; BX248235; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BX324185; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CU467647; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; NP_001082961.3; NM_001089492.3.
DR RefSeq; XP_005166482.2; XM_005166425.2.
DR AlphaFoldDB; E7FH61; -.
DR STRING; 7955.ENSDARP00000078525; -.
DR PaxDb; E7FH61; -.
DR PeptideAtlas; E7FH61; -.
DR Ensembl; ENSDART00000148390; ENSDARP00000124705; ENSDARG00000060023.
DR GeneID; 100037337; -.
DR KEGG; dre:100037337; -.
DR CTD; 54892; -.
DR ZFIN; ZDB-GENE-070410-100; ncapg2.
DR eggNOG; KOG1949; Eukaryota.
DR GeneTree; ENSGT00490000043432; -.
DR HOGENOM; CLU_008117_0_0_1; -.
DR InParanoid; E7FH61; -.
DR OMA; SMRTLGE; -.
DR OrthoDB; 79594at2759; -.
DR TreeFam; TF101163; -.
DR Reactome; R-DRE-2299718; Condensation of Prophase Chromosomes.
DR PRO; PR:E7FH61; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 7.
DR Bgee; ENSDARG00000060023; Expressed in testis and 26 other tissues.
DR ExpressionAtlas; E7FH61; baseline and differential.
DR GO; GO:0000796; C:condensin complex; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0030261; P:chromosome condensation; IEA:UniProtKB-KW.
DR GO; GO:0000070; P:mitotic sister chromatid segregation; IBA:GO_Central.
DR Gene3D; 1.25.10.10; -; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR024741; Condensin2_G2.
DR Pfam; PF12422; Condensin2nSMC; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
PE 3: Inferred from homology;
KW Cell cycle; Cell division; DNA condensation; Mitosis; Nucleus;
KW Reference proteome.
FT CHAIN 1..1140
FT /note="Condensin-2 complex subunit G2"
FT /id="PRO_0000448939"
FT REPEAT 460..493
FT /note="HEAT"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00103"
SQ SEQUENCE 1140 AA; 129093 MW; 07C357E47CB0A232 CRC64;
MSKRKQFLDS VHHEHVQDFL NFIKLHKDGA DPFDLAEILA ELQKSQRQDL WDRQLKLLQH
SLTVSPSERW ITGAEEDAGD MEVEVSEEQI QTMAVIEGVT IVSTVSVDAL QEKDNYTTLL
KCAQMLNAIE SALPLSQTPL QQAIHWLFEC WWRRDLQGKE ELGWTAFLVC LENTVTLDKP
VSELRRLCSL REVLLSVDFG SEKGQQVIDP LLQCFFRASH IKQEEGKRFL AFLFSWNDNF
IRMIHETIKN QLQFFPKTLS VHVAEIYFRA WRKASGPFLE EIESACIQDL MQHALLLHRN
SPVHSKVRQI LTYFHKQKFR EGVDEMLHRL YKPVLWKALK ATNAEVRANA TLLFTEAFPI
HDPNMSSEMV DQAVQKQLDL LFALLDDPQP LVRSSAVLGV CSVLARCWEV IPSAVITDLL
EKLILQLAND TSSPDVRCSV FMCMSIILDN SLSHPLMEKL LPALKSSLHD SSEKVRVAFV
GMLLKIKAAR AAKFWKVCSL EHLLARLEMD SAPVSKRIVN LLFNSFFPVN QPETVWCERC
VTLIQTNPGA ARKFYQHAYL YTAPANIVKL MLVIRKCLNV CIQNAGDEEF ASSNKENSTL
LEDVLSVQDT SSMASLLEIL VILWKSVQKS LMANQEAFKY TTAKFGSSLP QYLKIFQEER
CKAPLILLAS LLPASALPAL RSKVMSHLRS LKAGAAVTTY SQTLECLCSW GQISHIVELI
ENWLTEAAPV KEQGDEESTG KVHFDVLEES KPDLGLDYLD YMLLRPKTRE CLLTLPLDQM
RPLHKALNKW KSLLFSSLSG SEVSVAAIET ALRAFIFHGR LCIHLQHKFP EEREFLKSLE
HSVSWVEKRV LPFLVNSSSD QQLSLSTKIV ESCVTVCKNV LRVSVGDSDF RDHLLQHVAS
VLQTEKGYMC IPHLLALLTE IAHGCLSQKA EGQEDQLSLT IRILTNIFQK VVEILAHRLR
KDKEEGQELC CSSEEALHDF LLVTKFTSER SEFMTGVFSS LCAAVIIDIS RPLQKISHVE
ELLMPETVND LPPLSSTILK VTLGCPAVTR FFLSELSSSI ESEAIDSITQ WAAVTHILTI
IKESDAFIVE LKDIAGSVRR QIQNYYNSIS ENSDDIQRTI YESTVKMLND VLISCQQTNN