CNIH2_XENTR
ID CNIH2_XENTR Reviewed; 162 AA.
AC Q0VFK3;
DT 31-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Protein cornichon homolog 2;
DE Short=CNIH-2;
DE AltName: Full=Cornichon family AMPA receptor auxiliary protein 2;
GN Name=cnih2;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Regulates the trafficking and gating properties of AMPA-
CC selective glutamate receptors (AMPARs). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the cornichon family. {ECO:0000305}.
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DR EMBL; BC118797; AAI18798.1; -; mRNA.
DR RefSeq; NP_001072219.1; NM_001078751.1.
DR AlphaFoldDB; Q0VFK3; -.
DR SMR; Q0VFK3; -.
DR STRING; 8364.ENSXETP00000016261; -.
DR PaxDb; Q0VFK3; -.
DR DNASU; 779666; -.
DR Ensembl; ENSXETT00000018450; ENSXETP00000018450; ENSXETG00000008423.
DR GeneID; 779666; -.
DR KEGG; xtr:779666; -.
DR CTD; 254263; -.
DR Xenbase; XB-GENE-952875; cnih2.
DR eggNOG; KOG2729; Eukaryota.
DR HOGENOM; CLU_112942_1_0_1; -.
DR InParanoid; Q0VFK3; -.
DR OMA; ISIMNAD; -.
DR OrthoDB; 1602458at2759; -.
DR PhylomeDB; Q0VFK3; -.
DR TreeFam; TF300083; -.
DR Proteomes; UP000008143; Chromosome 4.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000008423; Expressed in brain and 1 other tissue.
DR GO; GO:0030425; C:dendrite; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0045202; C:synapse; IBA:GO_Central.
DR GO; GO:2000311; P:regulation of AMPA receptor activity; IBA:GO_Central.
DR GO; GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
DR InterPro; IPR003377; Cornichon.
DR InterPro; IPR033466; Cornichon_conserved.
DR Pfam; PF03311; Cornichon; 2.
DR SMART; SM01398; Cornichon; 1.
DR PROSITE; PS01340; CORNICHON; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..162
FT /note="Protein cornichon homolog 2"
FT /id="PRO_0000408977"
FT TOPO_DOM 1..10
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 11..31
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 32..72
FT /note="Lumenal"
FT /evidence="ECO:0000255"
FT TRANSMEM 73..93
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 94..138
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 139..161
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 162
FT /note="Lumenal"
FT /evidence="ECO:0000255"
SQ SEQUENCE 162 AA; 19136 MW; C512C9125BEB59DD CRC64;
MAFTFAAFCY MLTLVLCASL IFFIIWHIIA FDELRTDFKN PIEQGNPSRA RERVKNVERI
CCLLRKLVVP EYCIHGLFCL MFMCAAEWVT LGLNIPLLFY HLWRYFHRPA DGSEVMFDPV
SIMNVDILNY CQKEAWCKLA FYLLSFFYYL YRVGATVRYV SA