CNRB_DICDI
ID CNRB_DICDI Reviewed; 619 AA.
AC Q54RJ1;
DT 29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 24-MAY-2005, sequence version 1.
DT 25-MAY-2022, entry version 79.
DE RecName: Full=CLPTM1-like membrane protein cnrB;
GN Name=cnrB; ORFNames=DDB_G0283115;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
RN [2]
RP DISRUPTION PHENOTYPE.
RX PubMed=16507593; DOI=10.1242/jcs.02819;
RA Torija P., Vicente J.J., Rodrigues T.B., Robles A., Cerdan S., Sastre L.,
RA Calvo R.M., Escalante R.;
RT "Functional genomics in Dictyostelium: midA, a new conserved protein, is
RT required for mitochondrial function and development.";
RL J. Cell Sci. 119:1154-1164(2006).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- DISRUPTION PHENOTYPE: No visible phenotype.
CC {ECO:0000269|PubMed:16507593}.
CC -!- SIMILARITY: Belongs to the CLPTM1 family. {ECO:0000305}.
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DR EMBL; AAFI02000050; EAL65887.1; -; Genomic_DNA.
DR RefSeq; XP_639245.1; XM_634153.1.
DR AlphaFoldDB; Q54RJ1; -.
DR STRING; 44689.DDB0229859; -.
DR PaxDb; Q54RJ1; -.
DR EnsemblProtists; EAL65887; EAL65887; DDB_G0283115.
DR GeneID; 8623931; -.
DR KEGG; ddi:DDB_G0283115; -.
DR dictyBase; DDB_G0283115; cnrB.
DR eggNOG; KOG2489; Eukaryota.
DR HOGENOM; CLU_019907_3_1_1; -.
DR InParanoid; Q54RJ1; -.
DR OMA; NMLYGYL; -.
DR PhylomeDB; Q54RJ1; -.
DR PRO; PR:Q54RJ1; -.
DR Proteomes; UP000002195; Chromosome 4.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR InterPro; IPR008429; CLPTM1.
DR InterPro; IPR030434; CLPTM1L.
DR PANTHER; PTHR21347; PTHR21347; 1.
DR PANTHER; PTHR21347:SF0; PTHR21347:SF0; 1.
DR Pfam; PF05602; CLPTM1; 1.
PE 3: Inferred from homology;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..619
FT /note="CLPTM1-like membrane protein cnrB"
FT /id="PRO_0000331305"
FT TRANSMEM 26..46
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 324..344
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 360..380
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 384..404
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 445..465
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 474..496
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 566..619
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 566..588
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 619 AA; 71928 MW; 4E1E72B5BA69AD69 CRC64;
MNNQGGAVAA NGQRPQAQQQ QQQGGIMGII STLIRFMAIY YIASFAFSKF LGTGNNNNNG
GVVLNNNNGT TNTSIPSNSV RLANSWPEGI EFNMKVYLST SNETVGDWLV WEQDKLSYDW
KDSNTIPTKN ITFDTTPYLQ NNGSLFAHII TSRRAYLNQP KSQLHKVHPL IVYLPKPKPK
GKNLLEEKSK DEPEVEYDPT ELISYWKPTL SLHLIVDHTI YPPDSIPKEI VSYFNITNGF
YSPIIYCNEF WLYREHLKPV NETVKQLSIE INYSSMGLFK WQLQIQMQKS LDMQESFGGG
GNSAMGGASV GDEFKRMLTD NDPWILGLTL IVSVLHTIFE FLAFKNDIQF WKNNKSMEGL
SVKTITLNCV CMGIIFLYLL DNETSYMILA SSGFGFLVEF WKLGKAMTIK ITWMTSLPLP
KRIEFINKDE YMSKTKQYDD MAMKYLSWLL FPLVIGTSIY SLYYHEHKSW YSWVVSSLVR
TVYTFEFIMM TPQLFINYKL KSVSHLPWRV FMYRALNTFI DDLFAFIIKM PLLHRLSCLR
DDIIFIVYLY QRWIYPVDKK RSHYGSEEAE EVQQQDKKEI KEKVEEREEE KQEEEEEEKE
KEEESTSSSK VTKRKTKKV