CO1A2_ONCMY
ID CO1A2_ONCMY Reviewed; 1356 AA.
AC O93484;
DT 29-AUG-2001, integrated into UniProtKB/Swiss-Prot.
DT 29-AUG-2001, sequence version 2.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=Collagen alpha-2(I) chain;
DE AltName: Full=Alpha-2 type I collagen;
DE Flags: Precursor;
GN Name=col1a2;
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=11358497; DOI=10.1046/j.1432-1327.2001.02160.x;
RA Saito M., Takenouchi Y., Kunisaki N., Kimura S.;
RT "Complete primary structure of rainbow trout type I collagen consisting of
RT alpha1(I)alpha2(I)alpha3(I) heterotrimers.";
RL Eur. J. Biochem. 268:2817-2827(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 417-1356.
RC TISSUE=Fibroblast;
RA Saito M., Kunisaki N., Hirono I., Aoki T., Ishida M., Urano N., Kimura S.;
RT "Partial characterization of cDNA clones encoding the three distinct pro
RT alpha chains of type I collagen from rainbow trout.";
RL Fish. Sci. 64:780-786(1998).
CC -!- FUNCTION: Type I collagen is a member of group I collagen (fibrillar
CC forming collagen).
CC -!- SUBUNIT: Trimers of one alpha 2(I) and two alpha 1(I) chains.
CC -!- SUBCELLULAR LOCATION: Secreted, extracellular space, extracellular
CC matrix {ECO:0000255|PROSITE-ProRule:PRU00793}.
CC -!- TISSUE SPECIFICITY: Forms the fibrils of tendon, ligaments and bones.
CC In bones the fibrils are mineralized with calcium hydroxyapatite.
CC -!- DOMAIN: The C-terminal propeptide, also known as COLFI domain, have
CC crucial roles in tissue growth and repair by controlling both the
CC intracellular assembly of procollagen molecules and the extracellular
CC assembly of collagen fibrils. It binds a calcium ion which is essential
CC for its function. {ECO:0000250}.
CC -!- PTM: Prolines at the third position of the tripeptide repeating unit
CC (G-X-Y) are hydroxylated in some or all of the chains.
CC -!- SIMILARITY: Belongs to the fibrillar collagen family.
CC {ECO:0000255|PROSITE-ProRule:PRU00793}.
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DR EMBL; AB052837; BAB55663.1; -; mRNA.
DR EMBL; AB008372; BAA33379.1; -; mRNA.
DR RefSeq; NP_001117679.1; NM_001124207.1.
DR AlphaFoldDB; O93484; -.
DR SMR; O93484; -.
DR Allergome; 8977; Onc m alpha2I.
DR PRIDE; O93484; -.
DR GeneID; 100135811; -.
DR KEGG; omy:100135811; -.
DR OrthoDB; 1406711at2759; -.
DR GO; GO:0005581; C:collagen trimer; IEA:UniProtKB-KW.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR GO; GO:0005201; F:extracellular matrix structural constituent; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR008160; Collagen.
DR InterPro; IPR000885; Fib_collagen_C.
DR Pfam; PF01410; COLFI; 1.
DR Pfam; PF01391; Collagen; 4.
DR SMART; SM00038; COLFI; 1.
DR PROSITE; PS51461; NC1_FIB; 1.
PE 2: Evidence at transcript level;
KW Calcium; Collagen; Disulfide bond; Extracellular matrix; Glycoprotein;
KW Hydroxylation; Metal-binding; Pyrrolidone carboxylic acid; Repeat;
KW Secreted; Signal.
FT SIGNAL 1..22
FT /evidence="ECO:0000250|UniProtKB:P08123"
FT PROPEP 23..72
FT /note="N-terminal propeptide"
FT /evidence="ECO:0000250|UniProtKB:P08123"
FT /id="PRO_0000005821"
FT CHAIN 73..1113
FT /note="Collagen alpha-2(I) chain"
FT /evidence="ECO:0000250|UniProtKB:P08123"
FT /id="PRO_0000005822"
FT PROPEP 1114..1356
FT /note="C-terminal propeptide"
FT /evidence="ECO:0000250|UniProtKB:P08123"
FT /id="PRO_0000005823"
FT DOMAIN 1123..1356
FT /note="Fibrillar collagen NC1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00793"
FT REGION 22..1112
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 1171
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250|UniProtKB:Q03692"
FT BINDING 1173
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250|UniProtKB:Q03692"
FT BINDING 1174
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250|UniProtKB:Q03692"
FT BINDING 1176
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250|UniProtKB:Q03692"
FT BINDING 1179
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250|UniProtKB:Q03692"
FT MOD_RES 23
FT /note="Pyrrolidone carboxylic acid"
FT /evidence="ECO:0000250|UniProtKB:P08123"
FT MOD_RES 73
FT /note="Pyrrolidone carboxylic acid"
FT /evidence="ECO:0000250|UniProtKB:P08123"
FT MOD_RES 78
FT /note="Allysine"
FT /evidence="ECO:0000250|UniProtKB:P08123"
FT MOD_RES 171
FT /note="5-hydroxylysine; alternate"
FT /evidence="ECO:0000250|UniProtKB:P08123"
FT CARBOHYD 171
FT /note="O-linked (Gal...) hydroxylysine; alternate"
FT /evidence="ECO:0000250|UniProtKB:P08123"
FT CARBOHYD 1257
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 1153..1185
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00793"
FT DISULFID 1193..1354
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00793"
FT DISULFID 1262..1307
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00793"
SQ SEQUENCE 1356 AA; 126985 MW; 7BB2F1F80DB10C93 CRC64;
MLSFVDNRIL LLLAVTSLLA SCQSGGLKGP RGAKGPRGDR GPQGPNGRDG KAGLPGIAGP
PGPPGLGGNF AAQFDGGKGS DPGPGPMGLM GSRGPNGPPG APGPQGFTGH AGEPGEPGQT
GSIGARGPTG SAGKPGEDGN NGRPGKPGDR GGPGTQGARG FPGTPGLPGM KGHRGYNGLD
GRKGESGTAG AKGETGAHGA NGSPGPAGSR GLNGERGRAG PAGPAGARGA DGSTGPAGPA
GPLGAAGPPG FPGAPGPKGE IGGAGSNGPS GPQGGRGEPG INGAVGPVGP VGNPGNNGIN
GAKGAAGLPG VAGAPGFPGP RGGPGPQGPQ GSTGARGLGG DPGPSGQKGD SGAKGEPGHS
GVQGAAGPAG EEGKRGSTGE VGATGPAGLR GARGGAGTRG LPGLEGRGGP IGMPGARGAT
GPGGIRGAPG DAGRAGESGL TGARGLPGNS GQGGPPGKEG PPGAAGLDGR TGPPGPTGPR
GQPGNIGFPG PKGPGGEAGK GGDKGPTGAT GLRGGPGADG NNGAPGPAGV VGNTGEKGEQ
GPAGAPGFQG LPGPAGPAGE AGKAGNQGMP GDQGLPGPAG VKGERGNSGP AGSAGSQGAI
GARGPAGTPG PDGGKGEPGS VGIVGAAGHQ GPGGMPGERG AGGTPGPKGE KGEGGHRGLE
GNMGRDGARG GPGPSGPPGP SGANGEKGES GSFGPAGPAG LRGPSGERGE GGPAGLPGFA
GPPGSDGQSG PRGEKGPAGG KGDVGPAGPA GPSGQSGPSG ASGPAGPPGG RGDAGPSGLT
GFPGAAGRVG GPGPAGIAGP PGSAGPAGKD GPRGLRGDPG PGGPQGEQGV VGPAGISGDK
GPSGESGPPG APGTAGPQGV LGPSGFVGLP GSRGDKGLPG GPGAVGEPGR LGPAGASGPR
GPAGNIGMPG MTGTQGEAGR EGNSGNDGPP GRPGAAGFKG DRGEPGSPGA LGSSGQPGPN
GPAGSAGRPG NRGESGPTGN GGPVGAVGAR GAPGPAGPRG EKGGAGEKGD RGMKGLRGHG
GLQGMPGPNG PSGETGSAGI TGPAGPRGPA GPHGPPGKDG RAGGHGAIGP VGHRGSPGHL
GPAGPPGSPG LPGPAGPAGG GYDQSGGYDE YRADQPSFRA KDYEVDATIK SLNSQIENLL
TPEGSKKNPA RTCRDIRLSH PDWSSGFYWI DPNQGCIADA IKAYCDFSTG HTCIHPHPES
IARKNWYRSS ENKKHVWFGE TINGGTEFAY NDETLSPQSM ATQLAFMRLL ANQATQNITY
HCKNSVAYMD GENGNLKKAV LLQGSNDVEL RAEGNSRFTF NVLEDGCTRH TGQWSKTVIE
YRTNKPSRLP ILDIAPLDIG EADQEFGLDI GPVCFK