CO2A1_MAMAE
ID CO2A1_MAMAE Reviewed; 669 AA.
AC P85153;
DT 12-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 13-NOV-2007, sequence version 2.
DT 25-MAY-2022, entry version 29.
DE RecName: Full=Collagen alpha-1(II) chain;
DE AltName: Full=Alpha-1 type II collagen;
DE Flags: Fragment;
OS Mammut americanum (American mastodon).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Afrotheria; Proboscidea; Elephantidae; Mammut.
OX NCBI_TaxID=39053;
RN [1]
RP PROTEIN SEQUENCE, IDENTIFICATION BY MASS SPECTROMETRY, AND HYDROXYLATION AT
RP PRO-3; PRO-12; PRO-336; PRO-345; PRO-414; PRO-420; PRO-426 AND PRO-648.
RC TISSUE=Bone;
RA Asara J.M.;
RL Submitted (SEP-2007) to UniProtKB.
CC -!- FUNCTION: Type II collagen is specific for cartilaginous tissues. It is
CC essential for the normal embryonic development of the skeleton, for
CC linear growth and for the ability of cartilage to resist compressive
CC forces. {ECO:0000305}.
CC -!- SUBUNIT: Homotrimers of alpha 1(II) chains. {ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: Secreted, extracellular space, extracellular
CC matrix {ECO:0000250}.
CC -!- PTM: Contains mostly 4-hydroxyproline. Prolines at the third position
CC of the tripeptide repeating unit (G-X-P) are 4-hydroxylated in some or
CC all of the chains. {ECO:0000269|Ref.1}.
CC -!- PTM: Contains 3-hydroxyproline at a few sites. This modification occurs
CC on the first proline residue in the sequence motif Gly-Pro-Hyp, where
CC Hyp is 4-hydroxyproline. {ECO:0000250|UniProtKB:P05539}.
CC -!- MISCELLANEOUS: These protein fragments were extracted from 160,000 to
CC 600,000 year old bones. The tryptic peptides required multiple
CC purification steps in order to eliminate contaminants and to increase
CC the concentration of peptidic material.
CC -!- SIMILARITY: Belongs to the fibrillar collagen family. {ECO:0000255}.
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DR PRIDE; P85153; -.
DR GO; GO:0005581; C:collagen trimer; IEA:UniProtKB-KW.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
PE 1: Evidence at protein level;
KW Collagen; Direct protein sequencing; Extinct organism protein;
KW Extracellular matrix; Hydroxylation; Repeat; Secreted.
FT CHAIN <1..>669
FT /note="Collagen alpha-1(II) chain"
FT /id="PRO_0000291374"
FT REGION 1..28
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 314..438
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 636..669
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 3
FT /note="4-hydroxyproline"
FT /evidence="ECO:0000269|Ref.1"
FT MOD_RES 12
FT /note="4-hydroxyproline"
FT /evidence="ECO:0000269|Ref.1"
FT MOD_RES 336
FT /note="4-hydroxyproline"
FT /evidence="ECO:0000269|Ref.1"
FT MOD_RES 345
FT /note="4-hydroxyproline"
FT /evidence="ECO:0000269|Ref.1"
FT MOD_RES 413
FT /note="3-hydroxyproline"
FT /evidence="ECO:0000250|UniProtKB:P05539"
FT MOD_RES 414
FT /note="4-hydroxyproline"
FT /evidence="ECO:0000269|Ref.1"
FT MOD_RES 420
FT /note="4-hydroxyproline"
FT /evidence="ECO:0000269|Ref.1"
FT MOD_RES 426
FT /note="4-hydroxyproline"
FT /evidence="ECO:0000269|Ref.1"
FT MOD_RES 648
FT /note="4-hydroxyproline"
FT /evidence="ECO:0000269|Ref.1"
FT MOD_RES 650
FT /note="3-hydroxyproline"
FT /evidence="ECO:0000250|UniProtKB:P05539"
FT UNSURE 339
FT /note="A or S"
FT UNSURE 342
FT /note="A or S"
FT UNSURE 654
FT /note="S or A"
FT NON_TER 1
FT NON_TER 669
SQ SEQUENCE 669 AA; 72100 MW; 8875FA5F7ACC4CE5 CRC64;
GEPGGVGPIG PPGERGAPGN RXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXGAPGER GETGPPGPAG FAGPPGADGQ PGAKXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX VGPPGANGNP
GPAGPPGPAG KXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXG FTGLQGLPGP PGTSGDQGAS
GPSGPAGPR