COAT_SPMV
ID COAT_SPMV Reviewed; 157 AA.
AC Q86993;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 83.
DE RecName: Full=Coat protein;
DE AltName: Full=Capsid protein;
OS Satellite panicum mosaic virus (SPMV).
OC Viruses; Riboviria; Papanivirus.
OX NCBI_TaxID=154834;
OH NCBI_TaxID=4543; Cenchrus americanus (Pearl millet) (Pennisetum glaucum).
OH NCBI_TaxID=866555; Eremochloa ophiuroides.
OH NCBI_TaxID=38727; Panicum virgatum (Blackwell switchgrass).
OH NCBI_TaxID=158163; Stenotaphrum secundatum.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RA Masuta C., Hunter B.G., Sopher D.S.;
RT "Analysis of the genome of satellite panicum mosaic virus.";
RL Virology 159:329-338(1987).
RN [2]
RP X-RAY CRYSTALLOGRAPHY (1.9 ANGSTROMS).
RX PubMed=7552713; DOI=10.1038/nsb1095-882;
RA Ban N., McPherson A.;
RT "The structure of satellite panicum mosaic virus at 1.9-A resolution.";
RL Nat. Struct. Biol. 2:882-890(1995).
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Virus Particle ExploreR db; Note=Icosahedral capsid
CC structure;
CC URL="https://viperdb.scripps.edu/Info_Page.php?VDB=1stm";
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DR EMBL; M17182; AAA66885.1; -; Genomic_RNA.
DR RefSeq; NP_620827.1; NC_003847.1.
DR PDB; 1STM; X-ray; 1.90 A; A/B/C/D/E=1-157.
DR PDB; 5CVZ; X-ray; 3.30 A; A=17-157.
DR PDB; 5CW0; X-ray; 4.60 A; A=1-157.
DR PDBsum; 1STM; -.
DR PDBsum; 5CVZ; -.
DR PDBsum; 5CW0; -.
DR SMR; Q86993; -.
DR GeneID; 944443; -.
DR KEGG; vg:944443; -.
DR EvolutionaryTrace; Q86993; -.
DR Proteomes; UP000211162; Genome.
DR GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR InterPro; IPR010392; Satellite_virus_coat.
DR InterPro; IPR037164; Satellite_virus_coat_sf.
DR Pfam; PF06184; Potex_coat; 1.
DR SUPFAM; SSF88650; SSF88650; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Capsid protein; Reference proteome; Virion.
FT CHAIN 1..157
FT /note="Coat protein"
FT /id="PRO_0000222546"
FT STRAND 21..29
FT /evidence="ECO:0007829|PDB:1STM"
FT STRAND 36..40
FT /evidence="ECO:0007829|PDB:1STM"
FT HELIX 41..43
FT /evidence="ECO:0007829|PDB:1STM"
FT HELIX 45..49
FT /evidence="ECO:0007829|PDB:1STM"
FT STRAND 55..68
FT /evidence="ECO:0007829|PDB:1STM"
FT STRAND 70..76
FT /evidence="ECO:0007829|PDB:1STM"
FT STRAND 85..87
FT /evidence="ECO:0007829|PDB:1STM"
FT STRAND 91..93
FT /evidence="ECO:0007829|PDB:1STM"
FT STRAND 98..102
FT /evidence="ECO:0007829|PDB:1STM"
FT STRAND 121..128
FT /evidence="ECO:0007829|PDB:1STM"
FT STRAND 138..149
FT /evidence="ECO:0007829|PDB:1STM"
SQ SEQUENCE 157 AA; 16965 MW; A1F8A417BE79B67D CRC64;
MAPKRSRRSN RRAGSRAAAT SLVYDTCYVT LTERATTSFQ RQSFPTLKGM GDRAFQVVAF
TIQGVSAAPL MYNARLYNPG DTDSVHATGV QLMGTVPRTV RLTPRVGQNN WFFGNTEEAE
TILAIDGLVS TKGANAPSNT VIVTGCFRLA PSELQSS