COBD_PSEAE
ID COBD_PSEAE Reviewed; 312 AA.
AC Q9I469;
DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Cobalamin biosynthesis protein CobD;
GN Name=cobD; OrderedLocusNames=PA1275;
OS Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM
OS 14847 / LMG 12228 / 1C / PRS 101 / PAO1).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=208964;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C /
RC PRS 101 / PAO1;
RX PubMed=10984043; DOI=10.1038/35023079;
RA Stover C.K., Pham X.-Q.T., Erwin A.L., Mizoguchi S.D., Warrener P.,
RA Hickey M.J., Brinkman F.S.L., Hufnagle W.O., Kowalik D.J., Lagrou M.,
RA Garber R.L., Goltry L., Tolentino E., Westbrock-Wadman S., Yuan Y.,
RA Brody L.L., Coulter S.N., Folger K.R., Kas A., Larbig K., Lim R.M.,
RA Smith K.A., Spencer D.H., Wong G.K.-S., Wu Z., Paulsen I.T., Reizer J.,
RA Saier M.H. Jr., Hancock R.E.W., Lory S., Olson M.V.;
RT "Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic
RT pathogen.";
RL Nature 406:959-964(2000).
CC -!- FUNCTION: Converts cobyric acid to cobinamide by the addition of
CC aminopropanol on the F carboxylic group. {ECO:0000250}.
CC -!- PATHWAY: Cofactor biosynthesis; adenosylcobalamin biosynthesis.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the CobD/CbiB family. {ECO:0000305}.
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DR EMBL; AE004091; AAG04664.1; -; Genomic_DNA.
DR PIR; A83486; A83486.
DR RefSeq; NP_249966.1; NC_002516.2.
DR RefSeq; WP_003112351.1; NZ_QZGE01000005.1.
DR AlphaFoldDB; Q9I469; -.
DR STRING; 287.DR97_660; -.
DR PaxDb; Q9I469; -.
DR PRIDE; Q9I469; -.
DR EnsemblBacteria; AAG04664; AAG04664; PA1275.
DR GeneID; 881384; -.
DR KEGG; pae:PA1275; -.
DR PATRIC; fig|208964.12.peg.1325; -.
DR PseudoCAP; PA1275; -.
DR HOGENOM; CLU_054212_1_0_6; -.
DR InParanoid; Q9I469; -.
DR OMA; WGYRNER; -.
DR PhylomeDB; Q9I469; -.
DR BioCyc; PAER208964:G1FZ6-1300-MON; -.
DR UniPathway; UPA00148; -.
DR Proteomes; UP000002438; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015420; F:ABC-type vitamin B12 transporter activity; IEA:UniProtKB-UniRule.
DR GO; GO:0048472; F:threonine-phosphate decarboxylase activity; IEA:InterPro.
DR GO; GO:0009236; P:cobalamin biosynthetic process; IEA:UniProtKB-UniPathway.
DR GO; GO:0006779; P:porphyrin-containing compound biosynthetic process; IEA:UniProtKB-KW.
DR HAMAP; MF_00024; CobD_CbiB; 1.
DR InterPro; IPR031347; AmpE.
DR InterPro; IPR004485; Cobalamin_biosynth_CobD/CbiB.
DR PANTHER; PTHR34308; PTHR34308; 1.
DR Pfam; PF17113; AmpE; 1.
DR Pfam; PF03186; CobD_Cbib; 1.
DR TIGRFAMs; TIGR00380; cobD; 1.
PE 3: Inferred from homology;
KW Cell membrane; Cobalamin biosynthesis; Membrane; Porphyrin biosynthesis;
KW Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..312
FT /note="Cobalamin biosynthesis protein CobD"
FT /id="PRO_0000287753"
FT TRANSMEM 59..79
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 81..101
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 153..173
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 241..261
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 292..312
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 312 AA; 33873 MW; C74A880A7F474347 CRC64;
MSALLGILGV VLDARFGEPQ GWHPLVAFGR LADRLERRFN RSRLAGEADP GVGWRSHGVT
AWVLAVLPLT LLAWALAELP YLGWLVQALA LYAALGLRSL GEHAEPVALA LRAGDLDEAR
RRVGYLVSRD TRELDQAGVA RAATESVLEN GSDAVYAALF WFAVAGAPGV VLYRLSNTLD
AMWGYRNARF ERFGWAAAKI DDILNYLPAR LVALTYALLG DTRQALRCWR EQAPQWDSPN
AGPVMAAGAG ALGVFLGGAA IYHGELHQRP LLGSGPQPQG RDIYRALALV RQGVLLWLLV
LAGLWAMGWL HA