COBK_RHOCB
ID COBK_RHOCB Reviewed; 251 AA.
AC O68098; D5AV05;
DT 11-OCT-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1998, sequence version 1.
DT 25-MAY-2022, entry version 84.
DE RecName: Full=Precorrin-6A reductase;
DE EC=1.3.1.54;
DE AltName: Full=Precorrin-6X reductase;
GN Name=cobK; OrderedLocusNames=RCAP_rcc02043;
OS Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC Rhodobacteraceae; Rhodobacter.
OX NCBI_TaxID=272942;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC BAA-309 / NBRC 16581 / SB1003;
RX PubMed=9256491; DOI=10.1073/pnas.94.17.9384;
RA Vlcek C., Paces V., Maltsev N., Paces J., Haselkorn R., Fonstein M.;
RT "Sequence of a 189-kb segment of the chromosome of Rhodobacter capsulatus
RT SB1003.";
RL Proc. Natl. Acad. Sci. U.S.A. 94:9384-9388(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-309 / NBRC 16581 / SB1003;
RX PubMed=20418398; DOI=10.1128/jb.00366-10;
RA Strnad H., Lapidus A., Paces J., Ulbrich P., Vlcek C., Paces V.,
RA Haselkorn R.;
RT "Complete genome sequence of the photosynthetic purple nonsulfur bacterium
RT Rhodobacter capsulatus SB 1003.";
RL J. Bacteriol. 192:3545-3546(2010).
CC -!- FUNCTION: Catalyzes the reduction of the macrocycle of precorrin-6X
CC into precorrin-6Y.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=NADP(+) + precorrin-6B = 2 H(+) + NADPH + precorrin-6A;
CC Xref=Rhea:RHEA:23408, ChEBI:CHEBI:15378, ChEBI:CHEBI:57783,
CC ChEBI:CHEBI:58349, ChEBI:CHEBI:58532, ChEBI:CHEBI:77872; EC=1.3.1.54;
CC -!- PATHWAY: Cofactor biosynthesis; adenosylcobalamin biosynthesis;
CC cob(II)yrinate a,c-diamide from precorrin-2 (aerobic route): step 6/10.
CC -!- SIMILARITY: Belongs to the precorrin-6x reductase family.
CC {ECO:0000255|PROSITE-ProRule:PRU00356}.
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DR EMBL; AF010496; AAC16188.1; -; Genomic_DNA.
DR EMBL; CP001312; ADE85787.1; -; Genomic_DNA.
DR PIR; T03535; T03535.
DR RefSeq; WP_013067766.1; NC_014034.1.
DR PDB; 4X7G; X-ray; 1.22 A; A=1-251.
DR PDB; 5C4N; X-ray; 1.63 A; D=1-251.
DR PDB; 5C4R; X-ray; 3.17 A; A=1-251.
DR PDBsum; 4X7G; -.
DR PDBsum; 5C4N; -.
DR PDBsum; 5C4R; -.
DR AlphaFoldDB; O68098; -.
DR SMR; O68098; -.
DR STRING; 272942.RCAP_rcc02043; -.
DR EnsemblBacteria; ADE85787; ADE85787; RCAP_rcc02043.
DR GeneID; 31490905; -.
DR KEGG; rcp:RCAP_rcc02043; -.
DR eggNOG; COG2099; Bacteria.
DR HOGENOM; CLU_068627_1_0_5; -.
DR OMA; THPYAAQ; -.
DR OrthoDB; 1726104at2; -.
DR UniPathway; UPA00148; UER00217.
DR Proteomes; UP000002361; Chromosome.
DR GO; GO:0016994; F:precorrin-6A reductase activity; IEA:UniProtKB-EC.
DR GO; GO:0009236; P:cobalamin biosynthetic process; IEA:UniProtKB-UniPathway.
DR InterPro; IPR003723; Precorrin-6x_reduct.
DR PANTHER; PTHR36925; PTHR36925; 1.
DR Pfam; PF02571; CbiJ; 1.
DR TIGRFAMs; TIGR00715; precor6x_red; 1.
DR PROSITE; PS51014; COBK_CBIJ; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Cobalamin biosynthesis; NADP; Oxidoreductase;
KW Reference proteome.
FT CHAIN 1..251
FT /note="Precorrin-6A reductase"
FT /id="PRO_0000135921"
FT STRAND 4..7
FT /evidence="ECO:0007829|PDB:4X7G"
FT HELIX 11..22
FT /evidence="ECO:0007829|PDB:4X7G"
FT STRAND 27..31
FT /evidence="ECO:0007829|PDB:4X7G"
FT STRAND 35..37
FT /evidence="ECO:0007829|PDB:4X7G"
FT STRAND 45..48
FT /evidence="ECO:0007829|PDB:4X7G"
FT HELIX 52..63
FT /evidence="ECO:0007829|PDB:4X7G"
FT STRAND 67..70
FT /evidence="ECO:0007829|PDB:4X7G"
FT HELIX 77..90
FT /evidence="ECO:0007829|PDB:4X7G"
FT STRAND 93..97
FT /evidence="ECO:0007829|PDB:4X7G"
FT STRAND 109..115
FT /evidence="ECO:0007829|PDB:4X7G"
FT HELIX 116..122
FT /evidence="ECO:0007829|PDB:4X7G"
FT STRAND 129..132
FT /evidence="ECO:0007829|PDB:4X7G"
FT HELIX 139..144
FT /evidence="ECO:0007829|PDB:4X7G"
FT STRAND 148..156
FT /evidence="ECO:0007829|PDB:4X7G"
FT STRAND 165..171
FT /evidence="ECO:0007829|PDB:4X7G"
FT HELIX 178..187
FT /evidence="ECO:0007829|PDB:4X7G"
FT STRAND 192..196
FT /evidence="ECO:0007829|PDB:4X7G"
FT TURN 202..204
FT /evidence="ECO:0007829|PDB:4X7G"
FT HELIX 205..212
FT /evidence="ECO:0007829|PDB:4X7G"
FT STRAND 216..220
FT /evidence="ECO:0007829|PDB:4X7G"
FT STRAND 229..231
FT /evidence="ECO:0007829|PDB:4X7G"
FT HELIX 234..243
FT /evidence="ECO:0007829|PDB:4X7G"
SQ SEQUENCE 251 AA; 26048 MW; 877B825031DB202F CRC64;
MTRLLVLGGT TEASRLAKTL ADQGFEAVFS YAGRTGAPVA QPLPTRIGGF GGVAGLVDYL
TREGVSHVID ATHPFAAQMS ANAVAACAQT GVALCAFERA PWTAQAGDRW THVPDLAAAV
AALPQAPARV FLAIGKQHLR DFSAAPQHHY LLRLVDPPEG PLPLPDARAV IARGPFTVQG
DTELLRSETI THVVAKNAGG AGAEAKLIAA RSLGLPVILI DRPAVPARDI CATLEGVMGW
LADHGATPRG V