COBL7_ORYSJ
ID COBL7_ORYSJ Reviewed; 439 AA.
AC Q7XR91; A0A0P0WCU4;
DT 25-JUL-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2004, sequence version 2.
DT 03-AUG-2022, entry version 84.
DE RecName: Full=COBRA-like protein 7;
DE AltName: Full=Protein BRITTLE CULM1-like P1;
DE Flags: Precursor;
GN Name=BC1LP1; OrderedLocusNames=Os04g0540300, LOC_Os04g45700;
GN ORFNames=OSJNBa0011L07.10;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447439; DOI=10.1038/nature01183;
RA Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA Li J., Hong G., Xue Y., Han B.;
RT "Sequence and analysis of rice chromosome 4.";
RL Nature 420:316-320(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP IDENTIFICATION, AND NOMENCLATURE.
RX PubMed=12953108; DOI=10.1105/tpc.011775;
RA Li Y., Qian Q., Zhou Y., Yan M., Sun L., Zhang M., Fu Z., Wang Y., Han B.,
RA Pang X., Chen M., Li J.;
RT "BRITTLE CULM1, which encodes a COBRA-like protein, affects the mechanical
RT properties of rice plants.";
RL Plant Cell 15:2020-2031(2003).
CC -!- FUNCTION: Involved in determining the orientation of cell expansion,
CC probably by playing an important role in cellulose deposition. May act
CC by recruiting cellulose synthesizing complexes to discrete positions on
CC the cell surface (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Lipid-anchor, GPI-
CC anchor {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the COBRA family. {ECO:0000305}.
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DR EMBL; AL606587; CAE02786.2; -; Genomic_DNA.
DR EMBL; AP014960; BAS90288.1; -; Genomic_DNA.
DR AlphaFoldDB; Q7XR91; -.
DR STRING; 4530.OS04T0540300-00; -.
DR PRIDE; Q7XR91; -.
DR EnsemblPlants; Os04t0540300-00; Os04t0540300-00; Os04g0540300.
DR Gramene; Os04t0540300-00; Os04t0540300-00; Os04g0540300.
DR eggNOG; ENOG502QT9D; Eukaryota.
DR HOGENOM; CLU_038120_0_0_1; -.
DR InParanoid; Q7XR91; -.
DR OMA; EGWTFPR; -.
DR Proteomes; UP000000763; Chromosome 4.
DR Proteomes; UP000059680; Chromosome 4.
DR Genevisible; Q7XR91; OS.
DR GO; GO:0046658; C:anchored component of plasma membrane; IBA:GO_Central.
DR GO; GO:0010215; P:cellulose microfibril organization; IEA:InterPro.
DR GO; GO:0052324; P:plant-type cell wall cellulose biosynthetic process; IBA:GO_Central.
DR InterPro; IPR006918; COBRA_pln.
DR PANTHER; PTHR31673; PTHR31673; 1.
DR Pfam; PF04833; COBRA; 1.
DR PIRSF; PIRSF038122; COBRA; 1.
PE 3: Inferred from homology;
KW Cell membrane; Glycoprotein; GPI-anchor; Lipoprotein; Membrane;
KW Reference proteome; Signal.
FT SIGNAL 1..22
FT /evidence="ECO:0000255"
FT CHAIN 23..412
FT /note="COBRA-like protein 7"
FT /id="PRO_0000247639"
FT PROPEP 413..439
FT /note="Removed in mature form"
FT /evidence="ECO:0000255"
FT /id="PRO_0000247640"
FT LIPID 412
FT /note="GPI-anchor amidated asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 138
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 181
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 186
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 232
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 312
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 346
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 439 AA; 49305 MW; E755A441D9F79737 CRC64;
MDVDQLILFV FVCCLSSRFA DAYDPVDPNG NIIINWDFQS IENVYTVMVS VHNHQLYRHI
EQPGWRLSWR WAGNEIIWGM TGAEATEQGD CHRIRGATRP HCCEKQPVIV DLPPGTPYNN
QVSSCCRGGV LSSLTQNNRT STAAFQMVVG GFRRATYHDG DRGPALPSRF GVGVPGYSCS
NATKVNATSS ERFLLPRARA PCAVTWQVTC TYSQFMEAAS PTCCVSLSSF YNSTIVPCPR
CSCGCPRSPT APQCISEGEK PELPAGDGEA VAPVFRCTDH MCPVRVHWHV KISYREYWRV
KVTITNYNQV KNYSDWNLVV QHPNLRSLTQ LFSFNYQPLI EYGTLNDTGM FWGIQYYNEM
MLQDGNVQTE MILKKDKSDF TFSGGWAFPR RVYFDGHECV MPPPDQYPLL PNGGPDSRVS
AAQLIASSCL LLPFIFLIM
