COBL8_ARATH
ID COBL8_ARATH Reviewed; 653 AA.
AC Q9LIB6; O23648;
DT 22-AUG-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 114.
DE RecName: Full=COBRA-like protein 8;
DE Flags: Precursor;
GN Name=COBL8; Synonyms=SEB2; OrderedLocusNames=At3g16860; ORFNames=MUH15.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 322-653.
RC STRAIN=cv. Columbia;
RX PubMed=9524266; DOI=10.1016/s0378-1119(98)00049-3;
RA Gy I., Aubourg S., Sherson S., Cobbett C.S., Cheron A., Kreis M.,
RA Lecharny A.;
RT "Analysis of a 14-kb fragment containing a putative cell wall gene and a
RT candidate for the ARA1, arabinose kinase, gene from chromosome IV of
RT Arabidopsis thaliana.";
RL Gene 209:201-210(1998).
RN [4]
RP TISSUE SPECIFICITY.
RX PubMed=12376623; DOI=10.1104/pp.007468;
RA Roudier F., Schindelman G., DeSalle R., Benfey P.N.;
RT "The COBRA family of putative GPI-anchored proteins in Arabidopsis. A new
RT fellowship in expansion.";
RL Plant Physiol. 130:538-548(2002).
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Lipid-anchor, GPI-
CC anchor {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Expressed in roots, stems, leaves, flowers and
CC siliques. {ECO:0000269|PubMed:12376623}.
CC -!- SIMILARITY: Belongs to the COBRA family. {ECO:0000305}.
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DR EMBL; AP001308; BAB03074.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE75877.1; -; Genomic_DNA.
DR EMBL; Y14424; CAA74766.1; -; mRNA.
DR RefSeq; NP_188311.1; NM_112562.4.
DR AlphaFoldDB; Q9LIB6; -.
DR STRING; 3702.AT3G16860.1; -.
DR PaxDb; Q9LIB6; -.
DR PRIDE; Q9LIB6; -.
DR ProteomicsDB; 241007; -.
DR EnsemblPlants; AT3G16860.1; AT3G16860.1; AT3G16860.
DR GeneID; 820941; -.
DR Gramene; AT3G16860.1; AT3G16860.1; AT3G16860.
DR KEGG; ath:AT3G16860; -.
DR Araport; AT3G16860; -.
DR TAIR; locus:2093673; AT3G16860.
DR eggNOG; ENOG502QUPM; Eukaryota.
DR HOGENOM; CLU_420019_0_0_1; -.
DR InParanoid; Q9LIB6; -.
DR OMA; TLSTCCV; -.
DR OrthoDB; 453102at2759; -.
DR PhylomeDB; Q9LIB6; -.
DR PRO; PR:Q9LIB6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LIB6; baseline and differential.
DR Genevisible; Q9LIB6; AT.
DR GO; GO:0031225; C:anchored component of membrane; TAS:TAIR.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0010215; P:cellulose microfibril organization; IEA:InterPro.
DR InterPro; IPR006918; COBRA_pln.
DR Pfam; PF04833; COBRA; 1.
PE 2: Evidence at transcript level;
KW Cell membrane; Glycoprotein; GPI-anchor; Lipoprotein; Membrane;
KW Reference proteome; Signal.
FT SIGNAL 1..25
FT /evidence="ECO:0000255"
FT CHAIN 26..629
FT /note="COBRA-like protein 8"
FT /id="PRO_0000005583"
FT PROPEP 630..653
FT /note="Removed in mature form"
FT /evidence="ECO:0000255"
FT /id="PRO_0000005584"
FT LIPID 629
FT /note="GPI-anchor amidated asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 58
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 116
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 164
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 194
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 307
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 320
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 349
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 391
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 403
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 421
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 464
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 543
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 553
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 653 AA; 72023 MW; BD7BC6CA694B8F97 CRC64;
MGLTRNFILW ILLSSLFTAI QLTSSQRNTP PPRSKDADLC NGVFVSYTYL TGTKIKPNDT
KNQPYRFESE ITVLNNGRDE LKSWQVFVKF AHREILVSAT NAVLSDGSSL PASVENGTIF
AGFPSADLKT AIMTAGDVTQ MEARVELVGT QFGVAPPSVP LPKNITLVND GWSCPKPTQQ
GSNVLQVCCT PNPNITTSKI GQKFLPRQEG DLTIMYDVTR AYQSSYSAQV TIENHNLLGR
LDNWDLSFMW MKDEFLFSTK GAYPSVVDSS DCITGPQAKY YKDLDFSNVM SCARRPHIID
LPLTKYNDTN VGRIPYCCRN GTILPRSMDP EKSKSVFQIE VYKMPPDLNI SSITPPQSWQ
IKGNLNPDYK CGPPLRVSSS QFPDTSGLPS NKSAFASWQV VCNITQPTPP KCCVSFSSYF
NDSVIPCKTC ACGGCSSDRV ARTCSTTSPA LPLPYQALLI PFDNRTKLTN AWAVLKNRKV
PDPLPCGDNC GVSINWHLAT DYRGGWTARV TLFNWGDTDF VDWFTAVELR NAAPGFQKAY
SFNGSIIAVN GKNTTVLMEG LPGLNYLLAE KDGKNPSEDF RIPGKQQSVI SFTKKLTPGI
KVGSKDGFPT KVLFNGQECS LPSVLPTSNS HRKHVSTFLL ILTPFLALLF LRI
