COBQ_ACIAC
ID COBQ_ACIAC Reviewed; 492 AA.
AC A1TMF3;
DT 29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 06-FEB-2007, sequence version 1.
DT 25-MAY-2022, entry version 97.
DE RecName: Full=Cobyric acid synthase {ECO:0000255|HAMAP-Rule:MF_00028};
GN Name=cobQ {ECO:0000255|HAMAP-Rule:MF_00028}; OrderedLocusNames=Aave_1552;
OS Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Acidovorax.
OX NCBI_TaxID=397945;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AAC00-1;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T.,
RA Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P.;
RT "Complete sequence of Acidovorax avenae subsp. citrulli AAC00-1.";
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Catalyzes amidations at positions B, D, E, and G on
CC adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine,
CC and one molecule of ATP is hydrogenolyzed for each amidation.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC -!- PATHWAY: Cofactor biosynthesis; adenosylcobalamin biosynthesis.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC -!- SIMILARITY: Belongs to the CobB/CobQ family. CobQ subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
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DR EMBL; CP000512; ABM32141.1; -; Genomic_DNA.
DR RefSeq; WP_011794689.1; NC_008752.1.
DR AlphaFoldDB; A1TMF3; -.
DR STRING; 397945.Aave_1552; -.
DR PRIDE; A1TMF3; -.
DR EnsemblBacteria; ABM32141; ABM32141; Aave_1552.
DR KEGG; aav:Aave_1552; -.
DR eggNOG; COG1492; Bacteria.
DR HOGENOM; CLU_019250_2_1_4; -.
DR OMA; DVRMNPL; -.
DR OrthoDB; 744477at2; -.
DR UniPathway; UPA00148; -.
DR Proteomes; UP000002596; Chromosome.
DR GO; GO:0015420; F:ABC-type vitamin B12 transporter activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009236; P:cobalamin biosynthetic process; IEA:UniProtKB-UniPathway.
DR GO; GO:0006541; P:glutamine metabolic process; IEA:UniProtKB-KW.
DR CDD; cd01750; GATase1_CobQ; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR HAMAP; MF_00028; CobQ; 1.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR002586; CobQ/CobB/MinD/ParA_Nub-bd_dom.
DR InterPro; IPR033949; CobQ_GATase1.
DR InterPro; IPR004459; CobQ_synth.
DR InterPro; IPR011698; GATase_3.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR21343:SF1; PTHR21343:SF1; 1.
DR Pfam; PF01656; CbiA; 1.
DR Pfam; PF07685; GATase_3; 1.
DR SUPFAM; SSF52317; SSF52317; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00313; cobQ; 1.
DR PROSITE; PS51274; GATASE_COBBQ; 1.
PE 3: Inferred from homology;
KW Cobalamin biosynthesis; Glutamine amidotransferase; Reference proteome.
FT CHAIN 1..492
FT /note="Cobyric acid synthase"
FT /id="PRO_0000332316"
FT DOMAIN 259..453
FT /note="GATase cobBQ-type"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
FT ACT_SITE 340
FT /note="Nucleophile"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
FT ACT_SITE 445
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
SQ SEQUENCE 492 AA; 52084 MW; 7A651CA7F6815AF2 CRC64;
MIARCIMVLG TSSGAGKSWL ATALCRWFSD QGLRVAPFKA QNMSNNARVV AAPGGGQGEI
GSAQYFQALA ARTEPEVRMN PVLLKPEADT RSQVVLMGQV SEELTRMPWR GRSVHVWPHV
AAALDALRAE NDVVVIEGAG SPAEINLHAN DIVNMRVARH AGAHGLLVTD IDRGGAFAHL
YGTWALLPED ERALIQGFVL NKFRGDAALL APAPDMLRER TGVPTVATIP MQWRHGLPEE
DGVFDDAGHV RAGAGGAVHT TVAVVAYPRI SNLDEFQPLK GVPGLRLVWA RSPAEVAGAD
WIVLPGSKAT AADLAWLRAQ GLDAAIAAHA ARGGRVLGIC GGLQMLGEAL IDTHGVDGNA
PGLGLLPLVT AFDPAKTVRR TRTAFGALRG AWSALSGVAV QGYEIRHGRT AQHPAMAAAG
DVAHPAIPGL AWQNARGNVL GLYLHGLFED AVALRALFGA DVPTLDAVFD RLARGVDEWF
DPAWRAARRA GR