COBQ_ARCFU
ID COBQ_ARCFU Reviewed; 464 AA.
AC O28931;
DT 30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1998, sequence version 1.
DT 25-MAY-2022, entry version 118.
DE RecName: Full=Probable cobyric acid synthase;
GN Name=cobQ; Synonyms=cbiP; OrderedLocusNames=AF_1338;
OS Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC
OS 100126 / VC-16).
OC Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae;
OC Archaeoglobus.
OX NCBI_TaxID=224325;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16;
RX PubMed=9389475; DOI=10.1038/37052;
RA Klenk H.-P., Clayton R.A., Tomb J.-F., White O., Nelson K.E., Ketchum K.A.,
RA Dodson R.J., Gwinn M.L., Hickey E.K., Peterson J.D., Richardson D.L.,
RA Kerlavage A.R., Graham D.E., Kyrpides N.C., Fleischmann R.D.,
RA Quackenbush J., Lee N.H., Sutton G.G., Gill S.R., Kirkness E.F.,
RA Dougherty B.A., McKenney K., Adams M.D., Loftus B.J., Peterson S.N.,
RA Reich C.I., McNeil L.K., Badger J.H., Glodek A., Zhou L., Overbeek R.,
RA Gocayne J.D., Weidman J.F., McDonald L.A., Utterback T.R., Cotton M.D.,
RA Spriggs T., Artiach P., Kaine B.P., Sykes S.M., Sadow P.W., D'Andrea K.P.,
RA Bowman C., Fujii C., Garland S.A., Mason T.M., Olsen G.J., Fraser C.M.,
RA Smith H.O., Woese C.R., Venter J.C.;
RT "The complete genome sequence of the hyperthermophilic, sulphate-reducing
RT archaeon Archaeoglobus fulgidus.";
RL Nature 390:364-370(1997).
CC -!- FUNCTION: Catalyzes amidations at positions B, D, E, and G on
CC adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine,
CC and one molecule of ATP is hydrogenolyzed for each amidation (By
CC similarity). {ECO:0000250}.
CC -!- PATHWAY: Cofactor biosynthesis; adenosylcobalamin biosynthesis.
CC -!- SIMILARITY: Belongs to the CobB/CobQ family. CobQ subfamily.
CC {ECO:0000305}.
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DR EMBL; AE000782; AAB89906.1; -; Genomic_DNA.
DR PIR; A69417; A69417.
DR RefSeq; WP_010878835.1; NC_000917.1.
DR AlphaFoldDB; O28931; -.
DR STRING; 224325.AF_1338; -.
DR EnsemblBacteria; AAB89906; AAB89906; AF_1338.
DR GeneID; 24794950; -.
DR KEGG; afu:AF_1338; -.
DR eggNOG; arCOG00105; Archaea.
DR HOGENOM; CLU_019250_2_2_2; -.
DR OMA; EIHHGVA; -.
DR OrthoDB; 34382at2157; -.
DR PhylomeDB; O28931; -.
DR UniPathway; UPA00148; -.
DR Proteomes; UP000002199; Chromosome.
DR GO; GO:0015420; F:ABC-type vitamin B12 transporter activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009236; P:cobalamin biosynthetic process; IEA:UniProtKB-UniPathway.
DR GO; GO:0006541; P:glutamine metabolic process; IEA:UniProtKB-KW.
DR CDD; cd01750; GATase1_CobQ; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR HAMAP; MF_00028; CobQ; 1.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR002586; CobQ/CobB/MinD/ParA_Nub-bd_dom.
DR InterPro; IPR033949; CobQ_GATase1.
DR InterPro; IPR004459; CobQ_synth.
DR InterPro; IPR011698; GATase_3.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR21343:SF1; PTHR21343:SF1; 1.
DR Pfam; PF01656; CbiA; 1.
DR Pfam; PF07685; GATase_3; 1.
DR SUPFAM; SSF52317; SSF52317; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00313; cobQ; 1.
DR PROSITE; PS51274; GATASE_COBBQ; 1.
PE 3: Inferred from homology;
KW Cobalamin biosynthesis; Glutamine amidotransferase; Reference proteome.
FT CHAIN 1..464
FT /note="Probable cobyric acid synthase"
FT /id="PRO_0000141344"
FT DOMAIN 245..427
FT /note="GATase cobBQ-type"
FT ACT_SITE 321
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT ACT_SITE 419
FT /evidence="ECO:0000250"
SQ SEQUENCE 464 AA; 51312 MW; 7DDC6D0A8193E0C4 CRC64;
MPSLMVGGTT SSAGKSLLAA AFCRILARRG YDVAPFKAQN MSLNSFVTSK GKEIAIAQAY
QAFAAGIEPD ERMNPVLLKP KGNFVSQLVV MGEAVGDVDS RKYYGVKVEW LKRVVEEAYL
SLAEEYDFVV IEGAGGMAEI NLYERDLPNI HIARFARPDI LIVGDIDRGG VFASLYGTYA
LLPDDVKPLV KGFVINRLRG REDVLESGIR ELERLTGIRV LGVLPYLDYN FPSEDSLNIE
EWGAEGTVGI VRLPRVSNFT DFEPLREHAR FLSLNSSLNG CEVVIIPGSK DTIADLKALK
SSKLGEEIVR KAGEIPVIGI CGGYQIMCRE LVDMGVEHGR IRAKGLGLLD AVTEFREYRK
RTVQVEKRVN GNAVILDRIR GEKVWGYEIH KGITRASNPI FEDDGCASED GMCWGTYLHG
LFWNENVLRA LGGYLGIKFR QKEDWADLIA DEVEGRLDLG VLGL