COBQ_AZOSB
ID COBQ_AZOSB Reviewed; 492 AA.
AC A1KBC7;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 06-FEB-2007, sequence version 1.
DT 25-MAY-2022, entry version 83.
DE RecName: Full=Cobyric acid synthase {ECO:0000255|HAMAP-Rule:MF_00028};
GN Name=cobQ {ECO:0000255|HAMAP-Rule:MF_00028}; OrderedLocusNames=azo3517;
OS Azoarcus sp. (strain BH72).
OC Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Zoogloeaceae;
OC Azoarcus.
OX NCBI_TaxID=418699;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BH72;
RX PubMed=17057704; DOI=10.1038/nbt1243;
RA Krause A., Ramakumar A., Bartels D., Battistoni F., Bekel T., Boch J.,
RA Boehm M., Friedrich F., Hurek T., Krause L., Linke B., McHardy A.C.,
RA Sarkar A., Schneiker S., Syed A.A., Thauer R., Vorhoelter F.-J.,
RA Weidner S., Puehler A., Reinhold-Hurek B., Kaiser O., Goesmann A.;
RT "Complete genome of the mutualistic, N2-fixing grass endophyte Azoarcus sp.
RT strain BH72.";
RL Nat. Biotechnol. 24:1385-1391(2006).
CC -!- FUNCTION: Catalyzes amidations at positions B, D, E, and G on
CC adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine,
CC and one molecule of ATP is hydrogenolyzed for each amidation.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC -!- PATHWAY: Cofactor biosynthesis; adenosylcobalamin biosynthesis.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC -!- SIMILARITY: Belongs to the CobB/CobQ family. CobQ subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
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DR EMBL; AM406670; CAL96133.1; -; Genomic_DNA.
DR RefSeq; WP_011767239.1; NC_008702.1.
DR AlphaFoldDB; A1KBC7; -.
DR SMR; A1KBC7; -.
DR STRING; 62928.azo3517; -.
DR EnsemblBacteria; CAL96133; CAL96133; azo3517.
DR KEGG; azo:azo3517; -.
DR eggNOG; COG1492; Bacteria.
DR HOGENOM; CLU_019250_2_2_4; -.
DR OMA; EIHHGVA; -.
DR OrthoDB; 744477at2; -.
DR UniPathway; UPA00148; -.
DR Proteomes; UP000002588; Chromosome.
DR GO; GO:0015420; F:ABC-type vitamin B12 transporter activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009236; P:cobalamin biosynthetic process; IEA:UniProtKB-UniPathway.
DR GO; GO:0006541; P:glutamine metabolic process; IEA:UniProtKB-KW.
DR CDD; cd01750; GATase1_CobQ; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR HAMAP; MF_00028; CobQ; 1.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR002586; CobQ/CobB/MinD/ParA_Nub-bd_dom.
DR InterPro; IPR033949; CobQ_GATase1.
DR InterPro; IPR004459; CobQ_synth.
DR InterPro; IPR011698; GATase_3.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR21343:SF1; PTHR21343:SF1; 1.
DR Pfam; PF01656; CbiA; 1.
DR Pfam; PF07685; GATase_3; 1.
DR SUPFAM; SSF52317; SSF52317; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00313; cobQ; 1.
DR PROSITE; PS51274; GATASE_COBBQ; 1.
PE 3: Inferred from homology;
KW Cobalamin biosynthesis; Glutamine amidotransferase; Reference proteome.
FT CHAIN 1..492
FT /note="Cobyric acid synthase"
FT /id="PRO_1000002344"
FT DOMAIN 253..441
FT /note="GATase cobBQ-type"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
FT ACT_SITE 334
FT /note="Nucleophile"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
FT ACT_SITE 433
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
SQ SEQUENCE 492 AA; 51818 MW; A6652476E573206D CRC64;
MSKASALMVQ GTTSDAGKST LVAGLARALV RRGVRVAPFK PQNMALNSAV TADGGEIGRA
QALQAVAARI APHTDFNPVL LKPSSDIGAQ VIIHGKVMAN LSARDYHAYK PTAMAAVMAS
FDRLSAQYEH VLIEGAGSPA EINLRDRDIA NMGFAEAADV PVVLVADIDR GGVFAHLVGT
LELLSPSEQA RVRGFVINRF RGDIALLQPG LDWLTERTGR PVFGVLPYLH GLFLDAEDAL
ANGQVAADRD GAVLKVIAPV YPRISNHTDL DALRLHPQVD FRWVGPGQAI PPADLVVLPG
SKSVQADLAW LRAQGWEPAL RRHLRYGGKV IGICGGFQML GSTLADPHGL EGAPSTVAGL
GALDIETVLE REKQLVNVRG RLALDGEAAV AGYEIHMGVS RGADLDRPAV LLEDGRADGA
LSADGQVLGT YLHGLFDTPQ AVAALLDWAG LKGAAGVDLN ARREADLDRL ADAVEAHVDM
AALFGAAWPD AA