COBQ_CHLTE
ID COBQ_CHLTE Reviewed; 500 AA.
AC Q8KDV6;
DT 15-MAR-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=Cobyric acid synthase {ECO:0000255|HAMAP-Rule:MF_00028};
GN Name=cobQ {ECO:0000255|HAMAP-Rule:MF_00028}; OrderedLocusNames=CT0938;
OS Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS)
OS (Chlorobium tepidum).
OC Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.
OX NCBI_TaxID=194439;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49652 / DSM 12025 / NBRC 103806 / TLS;
RX PubMed=12093901; DOI=10.1073/pnas.132181499;
RA Eisen J.A., Nelson K.E., Paulsen I.T., Heidelberg J.F., Wu M., Dodson R.J.,
RA DeBoy R.T., Gwinn M.L., Nelson W.C., Haft D.H., Hickey E.K., Peterson J.D.,
RA Durkin A.S., Kolonay J.F., Yang F., Holt I.E., Umayam L.A., Mason T.M.,
RA Brenner M., Shea T.P., Parksey D.S., Nierman W.C., Feldblyum T.V.,
RA Hansen C.L., Craven M.B., Radune D., Vamathevan J.J., Khouri H.M.,
RA White O., Gruber T.M., Ketchum K.A., Venter J.C., Tettelin H., Bryant D.A.,
RA Fraser C.M.;
RT "The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic,
RT anaerobic, green-sulfur bacterium.";
RL Proc. Natl. Acad. Sci. U.S.A. 99:9509-9514(2002).
CC -!- FUNCTION: Catalyzes amidations at positions B, D, E, and G on
CC adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine,
CC and one molecule of ATP is hydrogenolyzed for each amidation.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC -!- PATHWAY: Cofactor biosynthesis; adenosylcobalamin biosynthesis.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC -!- SIMILARITY: Belongs to the CobB/CobQ family. CobQ subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
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DR EMBL; AE006470; AAM72173.1; -; Genomic_DNA.
DR RefSeq; NP_661831.1; NC_002932.3.
DR RefSeq; WP_010932618.1; NC_002932.3.
DR AlphaFoldDB; Q8KDV6; -.
DR SMR; Q8KDV6; -.
DR STRING; 194439.CT0938; -.
DR DNASU; 1007109; -.
DR EnsemblBacteria; AAM72173; AAM72173; CT0938.
DR KEGG; cte:CT0938; -.
DR PATRIC; fig|194439.7.peg.849; -.
DR eggNOG; COG1492; Bacteria.
DR HOGENOM; CLU_019250_2_0_10; -.
DR OMA; EIHHGVA; -.
DR OrthoDB; 744477at2; -.
DR UniPathway; UPA00148; -.
DR Proteomes; UP000001007; Chromosome.
DR GO; GO:0015420; F:ABC-type vitamin B12 transporter activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009236; P:cobalamin biosynthetic process; IEA:UniProtKB-UniPathway.
DR GO; GO:0006541; P:glutamine metabolic process; IEA:UniProtKB-KW.
DR CDD; cd01750; GATase1_CobQ; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR HAMAP; MF_00028; CobQ; 1.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR002586; CobQ/CobB/MinD/ParA_Nub-bd_dom.
DR InterPro; IPR033949; CobQ_GATase1.
DR InterPro; IPR004459; CobQ_synth.
DR InterPro; IPR011698; GATase_3.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR21343:SF1; PTHR21343:SF1; 1.
DR Pfam; PF01656; CbiA; 1.
DR Pfam; PF07685; GATase_3; 1.
DR SUPFAM; SSF52317; SSF52317; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00313; cobQ; 1.
DR PROSITE; PS51274; GATASE_COBBQ; 1.
PE 3: Inferred from homology;
KW Cobalamin biosynthesis; Glutamine amidotransferase; Reference proteome.
FT CHAIN 1..500
FT /note="Cobyric acid synthase"
FT /id="PRO_0000141294"
FT DOMAIN 253..446
FT /note="GATase cobBQ-type"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
FT ACT_SITE 334
FT /note="Nucleophile"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
FT ACT_SITE 438
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
SQ SEQUENCE 500 AA; 53715 MW; 91B73C1C57227DCD CRC64;
MTNIAILGTA SDVGKSIVAT ALCRIFSNAG VDVAPYKAQN MSNNSGVTPD GFEMGRAQIV
QAQAARVAPH ADMNPVLLKP NTDTGAQVVL QGKVCADKSA REYFGDTQRW AEAAFESLDR
LMVRHELLVI EGAGSCAEMN LYQRDFVNFK TARRAGAAVI LVADIDRGGV FAQVVGTLAV
IPPEDRALVK GVIINRFRGD KSLFEGGVKM LESMTGVPVL GVIPYFRGFT IDAEDAVPLS
SVVDPKQEPS GDKIGVAAIY FPHISNFTDL APLERDPSVE LHYLHRPKSL DGYKALILPG
SKNVRGDLAW LETMGWRDEI EKFRKRGGII VGLCGGYQML GASIADPYGV EGAPGASAGL
AMLPVETVLE REKALCNSVG KIAGTPFFVS GYEIHMGRTA LEPGASPLLE VTERNGVATD
DFDGAKSADG QVTGTYFHGF FDRPEVRTWF LRLLDGGYES PRGASVADPF ELLAKHFSEN
LDLEKLFAIA GLSVKGEKES