COBQ_CLOAB
ID COBQ_CLOAB Reviewed; 491 AA.
AC Q97JB2;
DT 15-MAR-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2001, sequence version 1.
DT 25-MAY-2022, entry version 104.
DE RecName: Full=Cobyric acid synthase {ECO:0000255|HAMAP-Rule:MF_00028};
GN Name=cobQ {ECO:0000255|HAMAP-Rule:MF_00028}; OrderedLocusNames=CA_C1374;
OS Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710
OS / VKM B-1787).
OC Bacteria; Firmicutes; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=272562;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787;
RX PubMed=11466286; DOI=10.1128/jb.183.16.4823-4838.2001;
RA Noelling J., Breton G., Omelchenko M.V., Makarova K.S., Zeng Q., Gibson R.,
RA Lee H.M., Dubois J., Qiu D., Hitti J., Wolf Y.I., Tatusov R.L., Sabathe F.,
RA Doucette-Stamm L.A., Soucaille P., Daly M.J., Bennett G.N., Koonin E.V.,
RA Smith D.R.;
RT "Genome sequence and comparative analysis of the solvent-producing
RT bacterium Clostridium acetobutylicum.";
RL J. Bacteriol. 183:4823-4838(2001).
CC -!- FUNCTION: Catalyzes amidations at positions B, D, E, and G on
CC adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine,
CC and one molecule of ATP is hydrogenolyzed for each amidation.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC -!- PATHWAY: Cofactor biosynthesis; adenosylcobalamin biosynthesis.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC -!- SIMILARITY: Belongs to the CobB/CobQ family. CobQ subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AE001437; AAK79342.1; -; Genomic_DNA.
DR PIR; C97069; C97069.
DR RefSeq; NP_348002.1; NC_003030.1.
DR RefSeq; WP_010964683.1; NC_003030.1.
DR AlphaFoldDB; Q97JB2; -.
DR STRING; 272562.CA_C1374; -.
DR DNASU; 1117557; -.
DR EnsemblBacteria; AAK79342; AAK79342; CA_C1374.
DR GeneID; 44997879; -.
DR KEGG; cac:CA_C1374; -.
DR PATRIC; fig|272562.8.peg.1579; -.
DR eggNOG; COG1492; Bacteria.
DR HOGENOM; CLU_019250_2_2_9; -.
DR OMA; EIHHGVA; -.
DR OrthoDB; 744477at2; -.
DR UniPathway; UPA00148; -.
DR Proteomes; UP000000814; Chromosome.
DR GO; GO:0015420; F:ABC-type vitamin B12 transporter activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009236; P:cobalamin biosynthetic process; IEA:UniProtKB-UniPathway.
DR GO; GO:0006541; P:glutamine metabolic process; IEA:UniProtKB-KW.
DR CDD; cd01750; GATase1_CobQ; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR HAMAP; MF_00028; CobQ; 1.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR033949; CobQ_GATase1.
DR InterPro; IPR004459; CobQ_synth.
DR InterPro; IPR011698; GATase_3.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR21343:SF1; PTHR21343:SF1; 1.
DR Pfam; PF07685; GATase_3; 1.
DR SUPFAM; SSF52317; SSF52317; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00313; cobQ; 1.
DR PROSITE; PS51274; GATASE_COBBQ; 1.
PE 3: Inferred from homology;
KW Cobalamin biosynthesis; Glutamine amidotransferase; Reference proteome.
FT CHAIN 1..491
FT /note="Cobyric acid synthase"
FT /id="PRO_0000141296"
FT DOMAIN 246..435
FT /note="GATase cobBQ-type"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
FT ACT_SITE 327
FT /note="Nucleophile"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
FT ACT_SITE 427
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
SQ SEQUENCE 491 AA; 54530 MW; 08D0828ED4B28840 CRC64;
MSRIMIQGTA SSVGKSILVA ALCRIFKQDG FSVCPYKSQN MSLNSYITLD GKEMGRAQVL
QAYAAGLEPE VYMNPILLKP TTDKSCQVIV KGEVYGVSSA KNYYNMKKEF APMLKEDFEE
LEDKFDIVVI EGAGSPAEIN LRENDIVNMG LAELVDAPVV LVGDIDKGGV FASLFGTVML
LEENERKRIK GTIINKFRGD VEILKPGLSM LEERINIPCF GVVPYFNLSL EDEDGAVYFN
TKVNSKIDVA VIKLPHISNF TDIDALKIEE DVSLRYITSS ENFGTPDLLI IPGSKNTIGD
LLYIRKNGIE NKIKQYAEKN GLIFGICGGY QMLGRLIEDP FKVETELGEI NGMGLLDIRT
VFAEKKVTTR VQGSVIDKQI PVYGYEIHMG ISSYGEKAKP FIKIENKVGI DDGAVNEGGN
IMGTYIHGIF DGANFREYII NFLRDKKGIE RKKSVVYEDV RNGEIDRLAD IVRNSLDMNS
IYSVMGIEGK K