COBQ_GEOKA
ID COBQ_GEOKA Reviewed; 503 AA.
AC Q5KZ06;
DT 15-MAR-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-2005, sequence version 1.
DT 25-MAY-2022, entry version 88.
DE RecName: Full=Cobyric acid synthase {ECO:0000255|HAMAP-Rule:MF_00028};
GN Name=cobQ {ECO:0000255|HAMAP-Rule:MF_00028}; OrderedLocusNames=GK1795;
OS Geobacillus kaustophilus (strain HTA426).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus;
OC Geobacillus thermoleovorans group.
OX NCBI_TaxID=235909;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HTA426;
RX PubMed=15576355; DOI=10.1093/nar/gkh970;
RA Takami H., Takaki Y., Chee G.-J., Nishi S., Shimamura S., Suzuki H.,
RA Matsui S., Uchiyama I.;
RT "Thermoadaptation trait revealed by the genome sequence of thermophilic
RT Geobacillus kaustophilus.";
RL Nucleic Acids Res. 32:6292-6303(2004).
CC -!- FUNCTION: Catalyzes amidations at positions B, D, E, and G on
CC adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine,
CC and one molecule of ATP is hydrogenolyzed for each amidation.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC -!- PATHWAY: Cofactor biosynthesis; adenosylcobalamin biosynthesis.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC -!- SIMILARITY: Belongs to the CobB/CobQ family. CobQ subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BA000043; BAD76080.1; -; Genomic_DNA.
DR RefSeq; WP_011231286.1; NC_006510.1.
DR AlphaFoldDB; Q5KZ06; -.
DR STRING; 235909.GK1795; -.
DR EnsemblBacteria; BAD76080; BAD76080; GK1795.
DR KEGG; gka:GK1795; -.
DR PATRIC; fig|235909.7.peg.1922; -.
DR eggNOG; COG1492; Bacteria.
DR HOGENOM; CLU_019250_2_2_9; -.
DR OMA; EIHHGVA; -.
DR UniPathway; UPA00148; -.
DR Proteomes; UP000001172; Chromosome.
DR GO; GO:0015420; F:ABC-type vitamin B12 transporter activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009236; P:cobalamin biosynthetic process; IEA:UniProtKB-UniPathway.
DR GO; GO:0006541; P:glutamine metabolic process; IEA:UniProtKB-KW.
DR CDD; cd01750; GATase1_CobQ; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR HAMAP; MF_00028; CobQ; 1.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR002586; CobQ/CobB/MinD/ParA_Nub-bd_dom.
DR InterPro; IPR033949; CobQ_GATase1.
DR InterPro; IPR004459; CobQ_synth.
DR InterPro; IPR011698; GATase_3.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR21343:SF1; PTHR21343:SF1; 1.
DR Pfam; PF01656; CbiA; 1.
DR Pfam; PF07685; GATase_3; 1.
DR SUPFAM; SSF52317; SSF52317; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00313; cobQ; 1.
DR PROSITE; PS51274; GATASE_COBBQ; 1.
PE 3: Inferred from homology;
KW Cobalamin biosynthesis; Glutamine amidotransferase; Reference proteome.
FT CHAIN 1..503
FT /note="Cobyric acid synthase"
FT /id="PRO_0000141303"
FT DOMAIN 255..444
FT /note="GATase cobBQ-type"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
FT ACT_SITE 337
FT /note="Nucleophile"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
FT ACT_SITE 436
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
SQ SEQUENCE 503 AA; 55344 MW; 1CCF7DD381E541C7 CRC64;
MAKALPIMFQ GTHSDAGKSV IATAFCRMFA QDGWKTAPFK SQNMSLNSYV TPDGNEIGRA
QGIQAEAAGV AARAEMNPIL IKPSREHESQ IVVLGKPYGN MQAFAYRNEF FHQGLAVIRQ
SLETLMNEYD RIVIEGAGSP AEVNLNDREL VNMRIARLAN APVVLIGDIE RGGVFASLVG
TLSLLEPEDR KRVIGVIINK FRGDVALLKP GLDWFEQHTG VPVLGVVPYL PDLAIDAEDS
LSLERFASSV GGEEAIDVAV IRCPKIANFT DIDPLLAEPD CRVRLVTHGD ELGAPDVIVL
PGSKNTIEDL IYMKKRGLAS RIVSLVNEGK ARVVGLCGGY QMLGAVIRDP YGVETPLPEV
KGLGLLPIET TLERTKITIR TEGMLTWAGE RFSVQGYEIH MGRSAPLPGY APLIEADGRH
EGAKHSDERV LGTYMHDLFH NDAFRTAFFN NIRRQKGIAP SGVRLFRSLK EKAFDRLAAH
VRQHVAVERI EQMMRQFGCR DHS