COBQ_PROMT
ID COBQ_PROMT Reviewed; 504 AA.
AC Q46JR6;
DT 29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2005, sequence version 1.
DT 25-MAY-2022, entry version 105.
DE RecName: Full=Cobyric acid synthase {ECO:0000255|HAMAP-Rule:MF_00028};
GN Name=cobQ {ECO:0000255|HAMAP-Rule:MF_00028}; OrderedLocusNames=PMN2A_0771;
OS Prochlorococcus marinus (strain NATL2A).
OC Bacteria; Cyanobacteria; Synechococcales; Prochlorococcaceae;
OC Prochlorococcus.
OX NCBI_TaxID=59920;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NATL2A;
RX PubMed=18159947; DOI=10.1371/journal.pgen.0030231;
RA Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S.,
RA Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M.,
RA Richardson P., Chisholm S.W.;
RT "Patterns and implications of gene gain and loss in the evolution of
RT Prochlorococcus.";
RL PLoS Genet. 3:2515-2528(2007).
CC -!- FUNCTION: Catalyzes amidations at positions B, D, E, and G on
CC adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine,
CC and one molecule of ATP is hydrogenolyzed for each amidation.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC -!- PATHWAY: Cofactor biosynthesis; adenosylcobalamin biosynthesis.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC -!- SIMILARITY: Belongs to the CobB/CobQ family. CobQ subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
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DR EMBL; CP000095; AAZ58262.1; -; Genomic_DNA.
DR RefSeq; WP_011294859.1; NC_007335.2.
DR AlphaFoldDB; Q46JR6; -.
DR SMR; Q46JR6; -.
DR STRING; 59920.PMN2A_0771; -.
DR EnsemblBacteria; AAZ58262; AAZ58262; PMN2A_0771.
DR KEGG; pmn:PMN2A_0771; -.
DR HOGENOM; CLU_019250_2_2_3; -.
DR OMA; EIHHGVA; -.
DR OrthoDB; 744477at2; -.
DR PhylomeDB; Q46JR6; -.
DR UniPathway; UPA00148; -.
DR Proteomes; UP000002535; Chromosome.
DR GO; GO:0015420; F:ABC-type vitamin B12 transporter activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009236; P:cobalamin biosynthetic process; IEA:UniProtKB-UniPathway.
DR GO; GO:0006541; P:glutamine metabolic process; IEA:UniProtKB-KW.
DR CDD; cd01750; GATase1_CobQ; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR HAMAP; MF_00028; CobQ; 1.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR002586; CobQ/CobB/MinD/ParA_Nub-bd_dom.
DR InterPro; IPR033949; CobQ_GATase1.
DR InterPro; IPR004459; CobQ_synth.
DR InterPro; IPR011698; GATase_3.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR21343:SF1; PTHR21343:SF1; 1.
DR Pfam; PF01656; CbiA; 1.
DR Pfam; PF07685; GATase_3; 1.
DR SUPFAM; SSF52317; SSF52317; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00313; cobQ; 1.
DR PROSITE; PS51274; GATASE_COBBQ; 1.
PE 3: Inferred from homology;
KW Cobalamin biosynthesis; Glutamine amidotransferase; Reference proteome.
FT CHAIN 1..504
FT /note="Cobyric acid synthase"
FT /id="PRO_0000332365"
FT DOMAIN 258..454
FT /note="GATase cobBQ-type"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
FT ACT_SITE 339
FT /note="Nucleophile"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
FT ACT_SITE 446
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
SQ SEQUENCE 504 AA; 56581 MW; F8823F468B8DCEAF CRC64;
MNIDLKRTPL MVLGTSSGAG KTLIATAICR CLKRKGEQPI PFKGQNMSNN AWVDTKGREM
AYSQALQSWS AGLEPSAEMN PVLLKPKGDC TSEVIHLGKS VGTSRAINYY EDWFDSGWEA
IKKGLAILLK SKTDGRLILE GAGSPVEVNL QHKDLTNLKL AKYLNANCIL VADIERGGVF
AQIIGTIALM KPDEKKLIKG IIINRFRGDK ALFETGVTWI EKETGIPVLG ILPWLKEIFP
PEDSLDLLER KQINQGAEIE IAIIKLPRIS NFSDLDPFFS DSSIQMRWIE PGQELGEPDV
LIIPGSKQTI KDLESLNKTG LSNQIKNYAK KGGNIFGICG GLQMLGKSLE DPHQQESINE
TSTSSNMGMN LLPIKTTFRE IKHTSQREEK VSWPFSQNIK GFEMHYGESD LINNKDSEII
SLFKNSSLGW VIEKKDKSFV GGTYLHGIFE NDEWRRQWIN KIRQKKGLNH LKIDEENNSD
KRERLLDLLT DAFEKNINID ILIK