COBQ_VIBVU
ID COBQ_VIBVU Reviewed; 483 AA.
AC Q8D737;
DT 04-APR-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 25-MAY-2022, entry version 105.
DE RecName: Full=Cobyric acid synthase {ECO:0000255|HAMAP-Rule:MF_00028};
GN Name=cobQ {ECO:0000255|HAMAP-Rule:MF_00028}; OrderedLocusNames=VV2_0330;
OS Vibrio vulnificus (strain CMCP6).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=216895;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CMCP6;
RA Rhee J.H., Kim S.Y., Chung S.S., Kim J.J., Moon Y.H., Jeong H., Choy H.E.;
RT "Complete genome sequence of Vibrio vulnificus CMCP6.";
RL Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Catalyzes amidations at positions B, D, E, and G on
CC adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine,
CC and one molecule of ATP is hydrogenolyzed for each amidation.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC -!- PATHWAY: Cofactor biosynthesis; adenosylcobalamin biosynthesis.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
CC -!- SIMILARITY: Belongs to the CobB/CobQ family. CobQ subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_00028}.
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DR EMBL; AE016796; AAO07290.1; -; Genomic_DNA.
DR RefSeq; WP_011081291.1; NC_004460.2.
DR AlphaFoldDB; Q8D737; -.
DR SMR; Q8D737; -.
DR EnsemblBacteria; AAO07290; AAO07290; VV2_0330.
DR KEGG; vvu:VV2_0330; -.
DR HOGENOM; CLU_019250_2_2_6; -.
DR OMA; EIHHGVA; -.
DR UniPathway; UPA00148; -.
DR Proteomes; UP000002275; Chromosome 2.
DR GO; GO:0015420; F:ABC-type vitamin B12 transporter activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009236; P:cobalamin biosynthetic process; IEA:UniProtKB-UniPathway.
DR GO; GO:0006541; P:glutamine metabolic process; IEA:UniProtKB-KW.
DR CDD; cd01750; GATase1_CobQ; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR HAMAP; MF_00028; CobQ; 1.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR002586; CobQ/CobB/MinD/ParA_Nub-bd_dom.
DR InterPro; IPR033949; CobQ_GATase1.
DR InterPro; IPR004459; CobQ_synth.
DR InterPro; IPR011698; GATase_3.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR21343:SF1; PTHR21343:SF1; 1.
DR Pfam; PF01656; CbiA; 1.
DR Pfam; PF07685; GATase_3; 1.
DR SUPFAM; SSF52317; SSF52317; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00313; cobQ; 1.
DR PROSITE; PS51274; GATASE_COBBQ; 1.
PE 3: Inferred from homology;
KW Cobalamin biosynthesis; Glutamine amidotransferase.
FT CHAIN 1..483
FT /note="Cobyric acid synthase"
FT /id="PRO_0000141341"
FT DOMAIN 252..439
FT /note="GATase cobBQ-type"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
FT ACT_SITE 333
FT /note="Nucleophile"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
FT ACT_SITE 431
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00028"
SQ SEQUENCE 483 AA; 52773 MW; FCA530AFEC57F4CB CRC64;
MEAKVTTLMV QGTTSDAGKS VLVAGLCRVL ARKGVNVAPF KPQNMALNSA VTKEGGEIGR
AQAVQAQACR IEPSVHMNPV LIKPNSDTGA QIILQGKALT NMDAYGFHNY KKVAMDTVMD
SFARLKDEYQ AIMIEGAGSP AEINLRQNDI ANMGFAEEAD VPVIIVADID RGGVFAHLYG
TLALLSPSEQ ARVKGFVINR FRGDIKLLES GLDWLEEKTG KPVIGVLPFL HGLNLEAEDA
ITSQQELSGE VKLKVVVPVL TRISNHTDFD VLRLHPQIDL RYVGKGERLE HADLIILPGS
KSVRDDLRYL REQGWDKDIL RHLRFGGKVL GICGGYQMLG ESISDPFGVE GEPGESVGLG
LLKTRTELTQ DKCLINTKGQ LSLNGKHVNV TGYEIHVGRS QVNEYQPITN DDGQLEGALS
ECGQIMGSYL HGFLDSEAVL ELICEWVNGV RIKAQNHQQL KEQAIDRIAD AIEEHLDLSQ
LGI